| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_23470 |
|---|
| Symbol | |
|---|
| ID | 8633982 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 2613494 |
|---|
| End bp | 2614591 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | transcription termination factor NusA |
|---|
| Protein accession | YP_003315096 |
|---|
| Protein GI | 269795641 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.156847 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0534331 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACATCG ACATGAGCGC GCTGCGCCTC CTCGAGCGCG AGCGGGAGAT CAGCCTCGAC
GTGCTGGTCT CCGCGATCGA GCAGGCGCTG GCGCTGGCCT ACCAGCGGAC CCCGGGCGCG
CAGCGCACCG CGCGGGTCGA GATCGACCGC AAGTCCGGCC ACGTGACGGT CTGGGCGCGC
GAGGACATCG AGACCGAGGA GCCGGTCGAG CCGCGCTACA GCGACGGAGA CGACGCCGAC
GGCACGGAGG ACGACGAGGC GCCGACGACC CGTGTCGTCC GCACCCTCGG TCCCGAGTTC
GACGACACCC CGACGGACTT CGGCCGCATC GCGACCTCGA CGGCTCGTCA GGTGATCATG
CAGCGCCTGC GCGACGCCGA GGACGACCAG GTGCTCGGGC AGTTCCGCGA CAAGGAGGGT
GAGCTCGTCT CGGGCATCAT CCAGCAGGGC CGCGACCCGC GCGTCGTGCT CGTGGACGTC
GGCGGCACCG AGGCGGTCCT CGGGGCGCAC GAGCAGGTGC CGACCGAGAA GTACACGCAC
GGCGAGCGTC TGCGGTCGTA CGTCCTCGAC GTGTCGCGCG GCATGAAGGG CCCGCAGATC
TCGCTGAGCC GGACGCACCC CAACCTCGTG CGCAAGCTCT TCGAGATGGA GGTCCCCGAG
GTCGCCGACG GCTCCGTGGA GATCGTCGCG ATCGCCCGCG AGGCCGGGCA CCGCACCAAG
ATGGCGGTGC GGGCACGGGT CTCCGGCCTC AACGCCAAGG GTGCCTGCAT CGGCCCGATG
GGCTCACGCG TGCGCGCCGT GATGGCCGAG CTGCACGACG AGAAGATCGA CATCGTCGAC
TGGAACGACG ACCCTGCGGC CTTCGTGGCG AGCGCGCTGT CGCCGGCGAC TGTGATCTCC
GTGACGGTCG TGGACGCCGA CGCCCGCGCA GCCCGCGTCA TCGTGCCGGA CTTCCAGCTG
TCGCTCGCGA TCGGCAAGGA GGGCCAGAAC GCCCGTCTGG CCGCGAAGCT CACCGGCTGG
CGCATCGACA TCCGCTCCGA CGGCGGCGGC GCCGAGGGCT CCGACGACGC CTCGACGACG
TCCTCGGACC CGCGGTAG
|
|---|
| Protein sequence | MDIDMSALRL LEREREISLD VLVSAIEQAL ALAYQRTPGA QRTARVEIDR KSGHVTVWAR
EDIETEEPVE PRYSDGDDAD GTEDDEAPTT RVVRTLGPEF DDTPTDFGRI ATSTARQVIM
QRLRDAEDDQ VLGQFRDKEG ELVSGIIQQG RDPRVVLVDV GGTEAVLGAH EQVPTEKYTH
GERLRSYVLD VSRGMKGPQI SLSRTHPNLV RKLFEMEVPE VADGSVEIVA IAREAGHRTK
MAVRARVSGL NAKGACIGPM GSRVRAVMAE LHDEKIDIVD WNDDPAAFVA SALSPATVIS
VTVVDADARA ARVIVPDFQL SLAIGKEGQN ARLAAKLTGW RIDIRSDGGG AEGSDDASTT
SSDPR
|
|---|
| |