Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_22090 |
Symbol | |
ID | 8633844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 2457163 |
End bp | 2460057 |
Gene Length | 2895 bp |
Protein Length | 964 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | |
Product | uncharacterized membrane protein, putative virulence factor |
Protein accession | YP_003314962 |
Protein GI | 269795507 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.339262 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGAGCAC GGCTGGCGGC GGCGAGCCAG ACCCTCGCGG GGGCCGCCGT GATGATCACC CTCGTCACGG TGCTGAGCCG GCTCCTCGGG TTCGGCCGCT GGGTCGTCCA GGCCAGCGAG CTCGGCACCG GTGGGGTCGC GAGCGCCTAC GCGACCGCGA ACGTGCTCCC CAACGTGCTC TTCGAGGTGG CTGCGGGCGG AGCGCTCGCC GGAGCGGTCG TCCCGCTGCT CGCCGGGCCG ATCCTGCGCC GTGCGAAGGT CGACGTCGAC GCGATCGCCT CGGCGCTCCT CACCTGGGCG GTCGTCGTCC TCGTCCCGCT CGGCCTGGCC CTCGCCGTCT TCGCGCGGCC CGTCATCGGG CTGCTCCCCG GTGTGGGGAC CGGTCCCGAG GCTGACGTCG CGACCTACTT CTTGCGGGTC TTCGCGATCC AGCTGCCGCT CTACGGCGTC GGCGTGGTGC TGGCCGGTGT GCTGCAGGCC GGCCGCCGGT TCTTCTGGCC CGCCGCCGCC CCCATGTTCT CGAGCGTCGT GGTGATCGTC GCGTACCTCG TGTTCGGACG CCTCGCCGAC GGGCAGCAGG GCAGCCCGGG CGAGCTCTCG GCCGCGGCCG TCGGCTGGCT CGCGTGGGGC ACCACCGCGG GTGTCGCGGC CATGAGCCTG CCGCTGCTCG TCCCCGCGCT GCGCACGGGC CTGCGGCTGC GCCCCAGCCT CCGGTTCCCC GCGGGCGTCG GGTCGCGCGC CCGGCGGCTC GCGACGGCCG GCATCGGCGC GCTCGTCGCC CAGCAGGTCT CCGTGCTCGT GGTGATGTAC GCGGCGCTCT CCTCGGGGGG CCAGCACACC TTCAACGTCT ACCAGTATTC GCAGGCGGTC TACGTGCTCC CGTACGCGGT GCTCGCGGTC CCGCTCGCGA CGAGCGCCTT CCCACGTCTC GCCGCTCGCG CCGACGCCGG CGACCGTGCC GGGTTCGCCC GCCTGAGCGC TGTCGCGACC CGCGCGGTCG TCGCCGTGAG TGCGGTCGGC GCCGCGGTCC TGCTGAGCGT CGCGGGCGCC GTCGAGGCGT TCTTCGACGC CTTCACCCCC GGCGGTACAG ACGGCATGGC CGTCGCGATC GCGTGGTCCG CCCCGGGGCT CGTCGGGTTC GCGCTGCTCT TCCTCCTCTC CCGGTCCCTC TACTCGCTCG ACGCGGGTCG CGCCGCGGTG GTCGGCGCCG CCCTCGGGTG GGGAGCGGTC GTCGCCGTCG CCGCGGTGCT CCCGGCGGTG CTCACCTCGG GGACGCAGGA CCAGACGCTC ACCCTGGCCT CCCTCGGCGC CGCCGGCTCC GCCGGGATGC TCGTCGCCGG GGTGACGCTC CTCGGCGCCG TGCGCCGCCG GGCAGGCGCC GCCGCTGTCG CGGGCCTGCC CCGCACTGCC GTCGTGGCCG TCCTCGCGGG CGCCGCAGGC GGCTGGCTGG GGCACGCGCT CGCCGACCTC CTGCTGCCGA CCGGCGCCTC GGTCGTCGAG GCGTTGCTGG CCGGCGTCGC CGCCGGGGTG CTCGCGCTCG TCGTCACCGC CGGGACCCTC GTGGTGGCCG ACACCTCGGT CCGCGACCTC GTCCGCGCCC GGCGTGCGGG CACGGCGCCG GAGCCTGGCG CAGCGTCAGA GCCGAGCACC GCGTCGGACT CAGGTACTGC GGCAGAGCCG GCGGCAGTGC CCGTCGCCGG GACCGGCGAC GTCCTCGGTC CCGGCAGCCT CGCGACGCTC CCTGACGTCC CGCCGGCCCG GGTCCTCCAG GTGCTCGGGT CGAGCGCCGG GGGAGTGGCC CGCCACGTCG GACAGCTGGC TGCAGCGCTC GGAGCGCCGG GCAGCGCGGC CCCCTCGGTC GTGGTCGTCG CGGGACCGGA GTCGGTCCGG ACCCTCGTCG CCTCCGAGCG CGTGCGCTTC GTGCCGGTCG AGATCACCGA CCGGCCCCGG CCGACGGCCG ACCTCGGTGC GGTGCGCACG CTGCGCGGTC TCTCGGCGCG TGCCGACGTG GTCCACGCGC ACGGCCTGCG TGCCGGTGCC CTCGCCGTGA TCGCGGCCCG GTCGCTGCGG CAGGGACACC GGCCCACGAT CGTCGTGACG CTCCACAACC TGCCGGTCGG CGGTCGTGCC GTCCGCACCG TCTCCGGTGT GCTCGAGCGC GTGGTCGCCC GCGGGGCCGG CACGGTCCTC GGGGTGAGCA CCGACCTCGT CGAGCGCGCA CGCGACCGCG GGGCCCGGTC GACGGCCCGG GCGCTCGTGC CCTCCCCGCA GCAGCAGGCC CCCGACGTCC CCGACCGGGC CACGACGCGT GCGGGGCTCG GCCTCGGGCC GGACGAGCGT CTGGTCGTGA CGGTCGGGCG CCTCGCGCTC CAGAAGGGCC TGCCGACGCT GCTCGACGCC GTCGCGCACG TCGGGCGCAC GGCCCCGCAG CACCGGGTGC GGTGGGTGGT CGCCGGAGGC GGGCCGCTGC ACGACGAGCT GGCCCGTCGC GTGCGTGACG AGCGTCTCCC CGTCGACCTG CTCGGACCGC GCGACGACGT CGCCGCCCTC CAGGGGGCCG CCGACATAGT GGTCAGCGCA GCGGTCTGGG AGGGGCAGCC GCTCAACCTG CAGGAGGCGC TGCGCGTCGG GGCCGCGGTG GTCGCCACCG ACGCCGGAGG CACCCGGGAG GTCACGGGAG ACGCCGCTGT GCTGGTCCCC GTGGGCGACG CGGCCGCCCT CGCCGACGCC GTCGCGGTCC TGCTGTCCGA CCCCGAGGCC CTCGCCGACA GGCGCCGCCG CTCGCTCGTC CAGGCCTCCG CGCTCCCGAC CGTGGGCGAC GCTGTGACGC AGCTCGCCAC CGTGTACCAC CGGCCTTCCC CGGCCGGGGG CCTCCCGGCC CGACCCGTCG ACTGA
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Protein sequence | MRARLAAASQ TLAGAAVMIT LVTVLSRLLG FGRWVVQASE LGTGGVASAY ATANVLPNVL FEVAAGGALA GAVVPLLAGP ILRRAKVDVD AIASALLTWA VVVLVPLGLA LAVFARPVIG LLPGVGTGPE ADVATYFLRV FAIQLPLYGV GVVLAGVLQA GRRFFWPAAA PMFSSVVVIV AYLVFGRLAD GQQGSPGELS AAAVGWLAWG TTAGVAAMSL PLLVPALRTG LRLRPSLRFP AGVGSRARRL ATAGIGALVA QQVSVLVVMY AALSSGGQHT FNVYQYSQAV YVLPYAVLAV PLATSAFPRL AARADAGDRA GFARLSAVAT RAVVAVSAVG AAVLLSVAGA VEAFFDAFTP GGTDGMAVAI AWSAPGLVGF ALLFLLSRSL YSLDAGRAAV VGAALGWGAV VAVAAVLPAV LTSGTQDQTL TLASLGAAGS AGMLVAGVTL LGAVRRRAGA AAVAGLPRTA VVAVLAGAAG GWLGHALADL LLPTGASVVE ALLAGVAAGV LALVVTAGTL VVADTSVRDL VRARRAGTAP EPGAASEPST ASDSGTAAEP AAVPVAGTGD VLGPGSLATL PDVPPARVLQ VLGSSAGGVA RHVGQLAAAL GAPGSAAPSV VVVAGPESVR TLVASERVRF VPVEITDRPR PTADLGAVRT LRGLSARADV VHAHGLRAGA LAVIAARSLR QGHRPTIVVT LHNLPVGGRA VRTVSGVLER VVARGAGTVL GVSTDLVERA RDRGARSTAR ALVPSPQQQA PDVPDRATTR AGLGLGPDER LVVTVGRLAL QKGLPTLLDA VAHVGRTAPQ HRVRWVVAGG GPLHDELARR VRDERLPVDL LGPRDDVAAL QGAADIVVSA AVWEGQPLNL QEALRVGAAV VATDAGGTRE VTGDAAVLVP VGDAAALADA VAVLLSDPEA LADRRRRSLV QASALPTVGD AVTQLATVYH RPSPAGGLPA RPVD
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