Gene Sked_21700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_21700 
Symbol 
ID8633805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2418061 
End bp2418525 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content73% 
IMG OID 
Productmembrane protein implicated in regulation of membrane protease activity 
Protein accessionYP_003314924 
Protein GI269795469 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.201609 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTGGT ACTGGTGGAT CGGAGCAGCG CTGCTCCTCG TGGTCGTGGA GGTCGTCACC 
CTCGACCTGG TCCTCATCAT GTTCGCCGGC GGCGCGATCG CCGCTGGCAT CGCGAGCGCC
CTGGGCCTCG GGCTCGTCGG GCAGATCGTC GTGTTCGGCG TCGTGTCCAC GCTCCTGCTG
CTGGCCCTGC GCCCGTGGCT GCTCAAGTAC CTCCGCCAGC GCGAGCCCCT CGTCGAGACC
GGCGCCGCCG CGCTCCCCGG TCGCGTCGGG ACCGTCGTGT CCGAGGTCGG CGAGACCGGC
GGGCGCATCA AGCTCCTCGG CGAGGTGTGG ACCGCCCGGT CCCTCGGCGC CGTGACCTTC
TCCCCGGGGA CCGACGTCCG CGTCGTCCGC ATCGAGGGCG CGACGGCTGT CGTAGACGCC
GTCGAGGCCC CCCACAGCTC ACCCGGCGCA CCGCCCGTCC TGTGA
 
Protein sequence
MDWYWWIGAA LLLVVVEVVT LDLVLIMFAG GAIAAGIASA LGLGLVGQIV VFGVVSTLLL 
LALRPWLLKY LRQREPLVET GAAALPGRVG TVVSEVGETG GRIKLLGEVW TARSLGAVTF
SPGTDVRVVR IEGATAVVDA VEAPHSSPGA PPVL