| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_21470 |
|---|
| Symbol | |
|---|
| ID | 8633782 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 2394740 |
|---|
| End bp | 2396329 |
|---|
| Gene Length | 1590 bp |
|---|
| Protein Length | 529 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | ATPase component of ABC transporters with duplicated ATPase domain |
|---|
| Protein accession | YP_003314901 |
|---|
| Protein GI | 269795446 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.437483 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTGA TCCGGCTGCA CGACGTCCAC GTGCGCTACG ACTCCACCCA GATCCTCCGC
GAGGCGTTCT TCCGCCTCGA GGCTGGAGAC CGTGTGGGCC TCATCGGCAA GAACGGGTCC
GGCAAGTCGA CGCTCCTCAA GCTGGTGCTC GGTCAGGTCG AGCCGGACAG CGGAACGGTC
ACCCTCGACC AGGGGCTCAA GATTGGGTAC TTCTCGCAGT TCTCCGAGCT CGACGGCACC
GCGACCATCA CCGAGGTGCT CGACGCGCTC TTCGTCGAGA TCAAAGAGGT CGAGGCCGAG
CTCGCGTCGA TCGACGCCGC CATCGCCGCC GACCCGACCG ACGGGCCCGC GCTCGACGCC
CTCGTGCAGC GCCAGGCAGA CCTCTTCGAG AAGATGGACC ACCTCGACGG CTGGGACTAC
TCCCGCCACA TCGACACCGC GCTCACCACC CTCGGCTTCG ACGAGGCGCA CCGCACCTGC
TCGATCGACG AGCTCTCCGG TGGTTGGCGC AACCGCGCGG CCCTCGCCAA GATCGTCCTC
GAGCGCCCCG ACGTGCTGCT GCTCGACGAA CCCACCAACT ATCTCGACGT CGCCGGTGTC
GAGTGGCTCG AGGCGTGGTT CCGAGACTTC CGCGGCGCGG CGATCGTCGT CTCGCACGAC
CGCAAGTTCC TCGACGCGGT CATCACCCGC ACCATCGAGG TCGAGAACTT CCACCTGCAC
GAGTACTCGG GGAACTTCGA GGAGTACGTG GTGCAGAAGC AGTTCCGCCT CAAGACGCTC
GAGGCGCAGT TCGTCCACGA GTCCGAGCTC CTCGCCTTCG AGTCCGAGGG CATCGCCGAC
CGGCGCGAGG CGGCGAAGGC CGCGAGCAAG GGCCTGGGCA ACCAGCTCGC CAAGATCAAG
AAGTCGCGCG CCCCGCGCCC GGTCGACCAG ATCATCACCG AGATCTACGG CGGCCTGCAC
GTCAAGGACG TCATGTGCCG CGTCGAGGGC CTGAGCAAGG CCTACGGCGA CAAGCGCTTG
TTCGACGAAC TCACCTTCGA GATCCGCCGC GGGAACCGGA TCGTCGTGCT GGGTGCCAAC
GGCTCCGGCA AGTCGACGCT CCTGCGGGTG CTGACGGGCG AGGAGGACGC CGACTCCGGG
CAGGCCGCGT GGACCAAGGG CACCTCGGTG ATCTCGTACA ACCAGGTCCT CGACGAGCTC
GACGACGCCG ACACCGTGAG CCACGCGGTC AACGCGATGC CGGACAGCCT CGCGCTCACC
GCGACCCGCA AGTCGGTCAA CAGGTTCCTC GCGATGTTCC AGTTCTCCGA CGCGGACCTC
AAGCAGAAGA TCGGCAACCT GTCCGGTGGT CAGCGCTCAC GTGTCGCCAT GGCGCAGTGC
CTGCTGTCGG GTGCGTCCGT GCTGGTGCTC GACGAGCCCA CCAACCACCT CGACCTCTCG
AGCACGCAGG TGATGGAGCG CGCCCTCGTG CACTTCCCCG GCGCGGTCGT GGTGGTCAGC
CACGACAGGT TCTTCACCGA CAAGATCGCC ACCCGCCGGA TCGTCTTCGG CGCCGCCGGC
TCCGGCGAGG TCGAGGTCAC GACCGCCTGA
|
|---|
| Protein sequence | MSLIRLHDVH VRYDSTQILR EAFFRLEAGD RVGLIGKNGS GKSTLLKLVL GQVEPDSGTV
TLDQGLKIGY FSQFSELDGT ATITEVLDAL FVEIKEVEAE LASIDAAIAA DPTDGPALDA
LVQRQADLFE KMDHLDGWDY SRHIDTALTT LGFDEAHRTC SIDELSGGWR NRAALAKIVL
ERPDVLLLDE PTNYLDVAGV EWLEAWFRDF RGAAIVVSHD RKFLDAVITR TIEVENFHLH
EYSGNFEEYV VQKQFRLKTL EAQFVHESEL LAFESEGIAD RREAAKAASK GLGNQLAKIK
KSRAPRPVDQ IITEIYGGLH VKDVMCRVEG LSKAYGDKRL FDELTFEIRR GNRIVVLGAN
GSGKSTLLRV LTGEEDADSG QAAWTKGTSV ISYNQVLDEL DDADTVSHAV NAMPDSLALT
ATRKSVNRFL AMFQFSDADL KQKIGNLSGG QRSRVAMAQC LLSGASVLVL DEPTNHLDLS
STQVMERALV HFPGAVVVVS HDRFFTDKIA TRRIVFGAAG SGEVEVTTA
|
|---|
| |