Gene Sked_20730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_20730 
Symbol 
ID8633708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2313858 
End bp2314676 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content74% 
IMG OID 
Producttryptophan synthase, alpha chain 
Protein accessionYP_003314829 
Protein GI269795374 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.177097 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.343375 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCGA CAGCACGACG GATCGACGAC CTCAAGGCCG AGGGGCGGGC GGCCCTCGTC 
GGCTACCTGC CTACCGGGTT CCCCACGGTC GACCAGTCGA TCGAGGCCGC ACGGGCGCTC
GTCGAGGCCG GCGCGGACGT CATCGAGCTC GGCATCCCGT ACAGCGACCC GGTGATGGAC
GGGCCCACCA TCCAGGAGGC CGTCGACCAC GCCCTCCGCT CGGGTGCGCG GGTCCGCGAC
GTGTTCCGCG TCGTCGAGGC CGTCGCCGAC CTCGGCGCGC CGGTGCTGGT CATGACGTAC
TTCAACCCGG TCCTGCGGTA CGGCGTCGAC GCCTTCGCCC GCGACCTCGC GGCCGCCGGC
GGTGCGGGTC TCATCACGCC GGACCTCGTC CCCGACGAGG CTGCCGAGTG GATCGAGGCG
GCGGACTCCC GCGACCTCGA CAAGGTGTTC CTCGTGGCGC CGAGCTCGAC CCCCGAGCGT
CTCGCGATGA CCTCCGCAGC CTCCCGCGGT TTTGTCTACG CCGCGTCGAC CATGGGTGTC
ACCGGAGAGC GTGCCACGGT CGGCGCGCGG GCCGAGGAGC TCGTCGCCGC GACCCGGGCG
GCGGGCGCAG AGCGCGTCTG CGTCGGCCTC GGTGTGTCGC GGCCCGAGCA GGCCGCGGAG
GTGGGCCGGT ACGCCGACGG CGTCATCGTC GGCTCGGCCT TCGTCAAGCC CCTGCTGGGG
GACGCGCCGT TCGCGGACCG CCTCACGCAG ATGCAGTCGG TGGTGTCCGG CATCGCCGCG
GGCGTCCGCT CGGCACGGAC CGGGGCGGTG TCCTCGTGA
 
Protein sequence
MSATARRIDD LKAEGRAALV GYLPTGFPTV DQSIEAARAL VEAGADVIEL GIPYSDPVMD 
GPTIQEAVDH ALRSGARVRD VFRVVEAVAD LGAPVLVMTY FNPVLRYGVD AFARDLAAAG
GAGLITPDLV PDEAAEWIEA ADSRDLDKVF LVAPSSTPER LAMTSAASRG FVYAASTMGV
TGERATVGAR AEELVAATRA AGAERVCVGL GVSRPEQAAE VGRYADGVIV GSAFVKPLLG
DAPFADRLTQ MQSVVSGIAA GVRSARTGAV SS