Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_20540 |
Symbol | |
ID | 8633689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 2287841 |
End bp | 2288608 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | uncharacterized protein, gamma-carboxymuconolactone decarboxylase subunit like protein |
Protein accession | YP_003314810 |
Protein GI | 269795355 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.125919 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.227707 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCCGTC GGCCGGGTGC GGCGGCCAGG GCGGAGCGCG CCACACTGTT CAGGGACGAG GCGTCCCCGT TCGCGGAGAC CGACCCCGAG CTCGTCGCGT TCTACGACGA CCTCGCCCTC GACGAGACCC TCCGCAAGGT CACGACCGAC CTGTCCCGCG CGGACCGGCT GACCTACCAG CTCGGGGCCC TCGTGGCGGT CGGGGCCGTC ACCGAGTTCC GCGGGCTCCT CCGTGCCGCG CTGGACAACG CCGTGACGCC CGTCCAGGCC AGGGAGGTCG TCTACCAGGC GGTCGCGTAC GTCGGGATGG CCCGCGCCGC GGACTTCGTC CGTGCGACCG ACGACGTGCT GACCGAGCGC GGCGTGGCCC TGCCGCTCGA GGGGATGTCG ACCACGACGC CCGAGACCCG CGCGACCGAC GGACTCGCGG TGCAGCAGCG GATCGTCGGC AAGAGCACGG TCGAGAGCAT GTACACGAAC GCGCCGGCCG ACGCGCTGCG GTTCCAGGAG CTGCTCTCCG CGAGCTGCTT CGGCGACTAC TACACGCGGG GCGGGCTCGA CGTGCAGCAA CGTGAGCTGC TGACCTTCTC GATCCTCACC GCCCTCGGCG GCGCCGACGC GCAGGTCGCC GGGCACGTCC AGGCCAACCT CAACGTCGGG AACAGCCGGG CCACGTTGCT CGACGTGCTC ACCGTCCTGC TGCCGCTCGT CGGGTACCCC CGCACGCTCA ACGCCCTGGC CGCGGTGAAC CAGGTCGCCC CGGCCTGA
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Protein sequence | MTRRPGAAAR AERATLFRDE ASPFAETDPE LVAFYDDLAL DETLRKVTTD LSRADRLTYQ LGALVAVGAV TEFRGLLRAA LDNAVTPVQA REVVYQAVAY VGMARAADFV RATDDVLTER GVALPLEGMS TTTPETRATD GLAVQQRIVG KSTVESMYTN APADALRFQE LLSASCFGDY YTRGGLDVQQ RELLTFSILT ALGGADAQVA GHVQANLNVG NSRATLLDVL TVLLPLVGYP RTLNALAAVN QVAPA
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