Gene Sked_19900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_19900 
Symbol 
ID8633625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2213440 
End bp2214468 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content72% 
IMG OID 
Productcondensin subunit ScpA 
Protein accessionYP_003314748 
Protein GI269795293 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGACGC TGCCTGAGGC ACCGGCCGCG ACCGACGTCG CGGTGTCTCC TGCGACGGAC 
GTCGCGGTGC CCTCTGCGAC CGACGTCGTG GTGCCAGCCC AGGAGCAGGT GTCCTCCGCC
TTCGCGGTGC ACCTCGACAA CTTCGAGGGT CCTTTCGACC TGCTGCTGTC GCTCATCGCC
AAGCACAAGC TCGACGTGAC GGAGATCGCG CTGGCCCAGG TGACGGACGA GTTCATCGCC
TACCTGCGGT CGGGGGAGCG TGACCTCGGG ACGACGAGCG AGTTCCTGCT CGTCGCGGCG
ACCCTGCTCG ACCTCAAGGC GGCACGCCTG CTGCCCTCGG GCGACGTCGA GGACTCCGAG
GACCTCGAGC TGCTCGAGGC CCGCGACCTG CTGTTCGTCC GGCTGCTGCA GTACCGGGCG
TACAAGCAGC TGGCGGGTGT GTTCTCCGAG CGCCTGGCGG AGCAGGGGCG CCGCACGCCG
CGCTCGGTCC CGCTGGAGAC GCAGTTCGCG GCCCTGCTGC CCGAGCTCGT GTGGACCACC
ACCCCGCAGG ACCTCGCCGC GCTGGCCGCG CACGCCCTCG CACCGAAGCC GGCCCCGCCG
ACGGTCGACG TCGCGCACCT GCACGCGCCC GCGGTGAGCG TCCGCGACCA GGCGGCCATC
GTCGTCGAGC GCCTGCGCGC CGGTGGCGCC CTCACCTTCC GCGACCTCGT GTCCGACGCC
GAGTCCGTCC TCGTGGTGGT CTCGCGCTTC CTCGCCCTCC TCGAGCTGTT CCGCGAGGGC
GTGGTCGGCT TCGACCAGAT CACCCCGCTC GCCGAGCTCA CGGTCCGCTG GACGGGCGAC
GACGACGGCG ACGTGGAGGT CCGCGGCGAC TTCGACGAGG TCGAGCCCGC CGACGAGGTC
ACGGTGGCCG CCGAGAGCGT GACCGACGAG ACCATCGCGC AGATGGCGGC GCAGCCGGTA
GGCACAGCGC AGTCGGTAGG CACGGCGCAG TCGGTAGTGA CGGCGCAGCC GACGGAGTCA
CCCTCATGA
 
Protein sequence
MATLPEAPAA TDVAVSPATD VAVPSATDVV VPAQEQVSSA FAVHLDNFEG PFDLLLSLIA 
KHKLDVTEIA LAQVTDEFIA YLRSGERDLG TTSEFLLVAA TLLDLKAARL LPSGDVEDSE
DLELLEARDL LFVRLLQYRA YKQLAGVFSE RLAEQGRRTP RSVPLETQFA ALLPELVWTT
TPQDLAALAA HALAPKPAPP TVDVAHLHAP AVSVRDQAAI VVERLRAGGA LTFRDLVSDA
ESVLVVVSRF LALLELFREG VVGFDQITPL AELTVRWTGD DDGDVEVRGD FDEVEPADEV
TVAAESVTDE TIAQMAAQPV GTAQSVGTAQ SVVTAQPTES PS