Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_19490 |
Symbol | |
ID | 8633584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 2171193 |
End bp | 2172866 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | FAD/FMN-dependent dehydrogenase |
Protein accession | YP_003314708 |
Protein GI | 269795253 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGACA CCGTCAAGCA CATGAAGTGG TGGGGCTGGG GCAACGAGGG CGTGGGGTTC CACCACGAGG ACAAGCCCGG CTTCGCCCCC TTCGTGGAGA AGGCTGTCGG GCTCGACCTC GGCTCCGCGA CGCGCGCGAG CGAGCCGTCC TTCGAGGACG TCGACGTCCC GGCCAGCCGC GCGTCCGAGG GCTTCGTCCG TGAGCTCACG GCCATCGTCG GCGGCGAGCA CGTGACGACC GACGACATGG TCCGCGTCAT CCATACCTAC GGCAAGGGCC TGCGCGACCT CGTGCGCATC CGCGGGAACC AGATCCTGCG CTCCCCCGAC GTCGTCGTGT ACCCGGCCGA CGAGGCGCAG GTGCAGCGCG TGGTCGACGC GGCCGTCGCC GTCGACGCCG TGATCATCCC CTTCGGCGGG GGCAGCAACA TCGCCGGCAG CCTCGAGCCG CTCCCCGCCG AGACCCGCAC CGTGGTGTCC CTCGACCTCG GTCGGCTCCG CGAGGTCGTC GACATCGACG CCGACTCCGG CCTCGCCCGC GTGCAGGCCG GCGCCCAGGG CCCCGACCTC GAGGCGCAGC TCAACGCGAA GGGCTGGACC ATCGGGCACT TCCCCGACAG CTTCACGCAC TCGACCGTCG GCGGCTGGGT CGCGACCCGC TCGACCGGCA TGCAGTCCGA CAAGTACGGC GACATCGCCG ACATCGCCCG CGGCCTGCGC GTCGTGCGCC CCGGCGACGT CCTCGTGCTG CGCCCGCTGC CCAGCACGTC GAGCGGGCCG AGCGTCCGCG AGATGATCCT CGGCAGCGAG GGCCGCCTCG GCGTCATCAC GGAGGTCACC GTCCAGGTGC ACCGCATCCC CGAGAAGCGG AACATCTACG CGTACTTCTT CCCCACCTGG GAGGCGGGCG TCGCCGCGAT GCAGGCGATC TCCGAGTCCG ACGCGTCGCC GTCGATCACC CGCATCTCCG ACGCGCGCGA GACCGCCTTC ACGCTCGCGA CGAGCAAGAA GCGCAGCGGG TTCTCCAAGT TCACCGCCGA GACCGCCCTG CCCAAGATCA TGTCCTCCAA GGGCTGGGAC CTCGACACGA TCTGCCTGTC GTTCATCGGC TACGAGGGCG GCGTCGCGCA CGCCAAGCAC CAGAAGAAGC TCGTCGACGC GATCGTCAAG AAGCACGGCG GCATGGGCGT CGGCGAGGGC CCTGGCCTGC TGTACGACCA GAAGAAGTTC GACACCCCGT ACCTGCGCGA CTTCTTGCTC GACATGGGCG CCGCCGGCGA CGTGTCGGAG ACCGCGGCGC CGTGGTCGAG GCTCAACCAG GTGCACGACG CCGTCTACGA GGCCGCGCAC AAGGCCTACG CCGAGATCGG CGTGACCGGC TGGATCATGT CGCACCTCTC GCACTCGTAC CACTCCGGCG CGTGCCTGTA CTTCACCTTC GCCTTCGTGT TCCAGGACGA CCCGCTCACC GAGTACGACA CGGTCAAGAG CGCCATCCAG CAGGCCTTCG TCGACAACCA CGCGACCATC TCGCACCACC ACGGCGTGGG ACGCGAGCAC TCCGCGTGGC TGGAGCAGGA CATCTCCCCC GAGGGCGTCA AGGTGATGAC GGCGCTGTTC GAGGGCGCGG ACCCCGGGGC GCACTTCAAC CCGAACAAGG TGGTCGCGGA CTAG
|
Protein sequence | MTDTVKHMKW WGWGNEGVGF HHEDKPGFAP FVEKAVGLDL GSATRASEPS FEDVDVPASR ASEGFVRELT AIVGGEHVTT DDMVRVIHTY GKGLRDLVRI RGNQILRSPD VVVYPADEAQ VQRVVDAAVA VDAVIIPFGG GSNIAGSLEP LPAETRTVVS LDLGRLREVV DIDADSGLAR VQAGAQGPDL EAQLNAKGWT IGHFPDSFTH STVGGWVATR STGMQSDKYG DIADIARGLR VVRPGDVLVL RPLPSTSSGP SVREMILGSE GRLGVITEVT VQVHRIPEKR NIYAYFFPTW EAGVAAMQAI SESDASPSIT RISDARETAF TLATSKKRSG FSKFTAETAL PKIMSSKGWD LDTICLSFIG YEGGVAHAKH QKKLVDAIVK KHGGMGVGEG PGLLYDQKKF DTPYLRDFLL DMGAAGDVSE TAAPWSRLNQ VHDAVYEAAH KAYAEIGVTG WIMSHLSHSY HSGACLYFTF AFVFQDDPLT EYDTVKSAIQ QAFVDNHATI SHHHGVGREH SAWLEQDISP EGVKVMTALF EGADPGAHFN PNKVVAD
|
| |