Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_17870 |
Symbol | |
ID | 8633423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 1993102 |
End bp | 1994289 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | 3-dehydroquinate synthase |
Protein accession | YP_003314548 |
Protein GI | 269795093 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.092005 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.568716 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGACG AGACGACCAC CAGCGCGACC ACTCCCGACA CCAGCGCCGG GGCAGCAGCG CAGCCGCCCG CCGTCGTGCG CGTCGACGCC GAGCACAGCT ACGACGTGGT CATCGGCAAG CAGCTCCTCG GCGAGCTGCC CCGCCTGCTC GGCGCGGACG TCAAGAAGGT GCTCGTCGTG CACACCGAGG CCATGGAGGC CTCGGCCGCC GTGGTCCGCG AAGACCTGCT CGCCCAGGGC TACGAGGCGC TCCTCGCCGT CATCCCCGAC GCCGAGGGAG CGAAGTCCGT CGATGTCGTG GCCTTCTGCT GGCAGGTCCT CGGGCAGTCC GACTTCACGC GCAGCGACGC GATCGTCTCG CTCGGCGGCG GAGCGACCAC CGACGTCGCC GGCTTCATCG CCGCCACCTG GCTGCGGGGC ATCGCCGTGG TGCACATCCC CACGACGCTG CTCGCCATGG TCGACGCGGC CGTCGGCGGC AAGACCGGCA TCAACACCGC CGAGGGCAAG AACCTCGTCG GTGCCTTCCA CTCGCCGGTC GGCGTGCTCT GCGACCTCGT CGCCCTCGAG ACCCTGCCCA AGTGGGACTT CGTGGCCGGG CTCGGCGAGA TCATCAAGAC CGGGTTCATC GCCGACCCCG TGATCCTCGA CCTCGTCGAG GCCAACGCCG AGGCCCTCGG TTCTTGGCCC GCGAGCATCG ACGACCATCT CTGGGGCGTC GTCCGCGAGC TCGTCGAGCG CAGCGTCGCC GTCAAGGCAC GCGTGGTGAG CCAGGACCTC AAGGAGGCGT CGCTCCGCGA GATCCTCAAC TACGGGCACA CCCTCGCGCA CGCCATCGAG CAGGTCGAGC GTTTCGCGTG GCGCCACGGT GCCGCCGTGT CCGTCGGGAT GGTCTTCGCG GCCGAGCTCG CCCGCCTCGC GGGTCGCCTC GACGACGAGG TCGTCGACCG GCACCGCTCC ATCCTCGCCT CTGTCGGTCT GCCGCTCACC TACCGCGGTG ACCGCTGGGA GCAGCTCCTC GCCGTGATGC GCCGCGACAA GAAGTCCCGC GGCGACCTGC TCCGCTTCGT CGTCCTCGAG GACATCGGCA AGGTCGGTCG CCTCGAGGGG CCCGACCCGA CGCTCCTCGC CGCCGCCTAC GCCGAGATCA GCGCCGACGC CCCGACCAGT CGGGCCGTCT CGCTCTAG
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Protein sequence | MTDETTTSAT TPDTSAGAAA QPPAVVRVDA EHSYDVVIGK QLLGELPRLL GADVKKVLVV HTEAMEASAA VVREDLLAQG YEALLAVIPD AEGAKSVDVV AFCWQVLGQS DFTRSDAIVS LGGGATTDVA GFIAATWLRG IAVVHIPTTL LAMVDAAVGG KTGINTAEGK NLVGAFHSPV GVLCDLVALE TLPKWDFVAG LGEIIKTGFI ADPVILDLVE ANAEALGSWP ASIDDHLWGV VRELVERSVA VKARVVSQDL KEASLREILN YGHTLAHAIE QVERFAWRHG AAVSVGMVFA AELARLAGRL DDEVVDRHRS ILASVGLPLT YRGDRWEQLL AVMRRDKKSR GDLLRFVVLE DIGKVGRLEG PDPTLLAAAY AEISADAPTS RAVSL
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