Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_17550 |
Symbol | |
ID | 8633391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 1954108 |
End bp | 1956252 |
Gene Length | 2145 bp |
Protein Length | 714 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | protein-export membrane protein SecD |
Protein accession | YP_003314516 |
Protein GI | 269795061 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.122587 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCCACCA CCAACCGCTC CACCTCCCGT CCGGGACGGT CGCTCATCGG GCTCGGGATC ATCGTCCTGG TCCTCTTCGG CAGCATCGGC ATCGGGACGT GGCAGTCTGA CGCCTCGTGG TCGCCGAAGC TCGCCCTGGA CCTCGAGGGC GGCACGCAGA TCATCCTGCA GCCCGTGACC ACGGACGGTC AGACGGTGAC CTCCGAGGAC ATCAACCAGG CGATCGCGAT CATCCGTCAG CGTGTCGACT CCTCGGGCGT CTCCGAGGCG GAGATCACCA GCCAGGGTGG CAGCAACATC GTGGTGGCCC TGCCGGGCCA GCCGAGCCAG GAGACGCTCG ACCTGGTCCG GGAGTCTGCG CAGATGCAGT TCCGGCCTGT CCTCTCCTTC TCGATGGTGG CCCCGACGGC CCTGCCCACG GAGGACCCGA CGACCGGTCC GACGGCGCCG ACCGACGTGC CCACCGAGGA CGTCGCGCCC GAGGACGGTG CGACCACCGA CGCTCCTGAG GAGCCCGCGA CCGACGCGAC GACCGAGCCG GCCGAGTCCG GCTCCGGTGG CGGCGTCGCC GCAGCCACGG ACCCGGCCGT CGAGCCGACG ACGGACGCGG CGACGGAGCC TGCCGTGGAG CCCACGACCG ACGCGACCGA GCCTGCCGTG GAGCCCACGA CGGACGCCGA GGTCCCGCTC CCGTCCAACC CGAGCGACCT CGCCCAGATC ACCCCCGAGC TCCTCGCCGA GTTCCAGGCG CTGACCTGCA GCCCCGACGC GAGCGCCGCG GGCACCGCGC CCAAGGACCC CGCGTCGCCC ATCGCCGTCT GCTCGGTCGA CGGGACGATG AAGTACATCC TCGGCCCGAT GGAGATCGCC GGGACCGAGA TCGACAGCGC CAGCTCCGGC CTCCAGGTCA ACTCGCAGGG CGTCGCGCTC AACACCTGGG CCGTGAACCT GCGCTTCACC GCTGCCGGGA CCGACAAGTT CGCCGACGTG ACGACGCGTC TCGCGACCCT GCCGACGTAC GCCCAGTGGA TCTCCACGGA GAACCCGACC CTGGCACCGA ACATGTTCGC CATGGTCCTC GACAACCAGG TCATCGGGGC GCCCGGTGTC ACGGCGACGA TCCCCGACGG TCGTGCCGAG ATCACGGGCA GCTACACGCG CGAGACCGCG ACGGCACTGG CGAACCAGCT GAACTTCGGT GCGCTCCCGC TCACCTTCGA GGTGCAGAGC GAGCAGCAGA TCTCGGCGAC CCTCGGCAGC GAGCAGCTCG AGAAGGGCAT GATCGCCGGG CTCATCGGCC TCCTCCTCGT GGTCGTCTAC TCGCTGTTCC AGTACCGCGC CCTCGGTCTC GTCACCGTCG CCTCGCTGCT CATCGCCGGG CTGGTGACCT ACGGGATGAT CACCCTGCTG TCGTGGACGC AGGGATACCG CCTCTCCCTC CCGGGAGTCG CCGGCCTCAT CGTCGCGATC GGCATCACGG CCGACTCGTT CATCGTGTAC TTCGAACGCA TCCGTGACGA GCTGCGCGAC GGCAGGTCTC TGACGTCCGC GGTCGACACC GGGTGGGACC GCGCGCGCCG CACGATCGTC GCCTCGGACA CGGTGAACTT CCTCGCTGCC GTGGTGCTCT ACTTCCTCGC CGTCGGCGGG GTCCGCGGGT TCGCCTTCAC CCTCGGCCTC ACGACGCTGG TCGACCTCAT CGTCGTGTTC TTCTTCACGC ACCCGCTGAT GAAGCTCCTC GCCAGGACCC GGTTCTTCGC GGACGGGCAC CCGGCGTCCG GCCTCGACCC GCACCGCCTC GGCGCGACGG GGGTCCGCTA CGCGGGCCGT GGCCGCGTGG TCACGCCCGC CACGGCGGCT GCGACCCCGG GCCTCACCGA GGACCGCCCC GCCGAGCCCA CGGGCAAGAA GAAGAAGAAG CAGCTGGTCC CCGCCGGCGC TGCCACGGCC GCGCCCACGA TGACCATCGC CGAGCGTCGT GCCCTGGCCG CGGCCGAGGC TGCCGCGCAG AAGTCCGACG CTGCTGAGGC GTCCGACTCC TCGGAGGCCG AGACCGAGCA CGACCCGGCG GGCACCCCGC CGGCTGACGA CACCCGGACC GACGGCACGC CCGCGTCCGA CGAGCGCAAG GACGGGAACC TCTGA
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Protein sequence | MATTNRSTSR PGRSLIGLGI IVLVLFGSIG IGTWQSDASW SPKLALDLEG GTQIILQPVT TDGQTVTSED INQAIAIIRQ RVDSSGVSEA EITSQGGSNI VVALPGQPSQ ETLDLVRESA QMQFRPVLSF SMVAPTALPT EDPTTGPTAP TDVPTEDVAP EDGATTDAPE EPATDATTEP AESGSGGGVA AATDPAVEPT TDAATEPAVE PTTDATEPAV EPTTDAEVPL PSNPSDLAQI TPELLAEFQA LTCSPDASAA GTAPKDPASP IAVCSVDGTM KYILGPMEIA GTEIDSASSG LQVNSQGVAL NTWAVNLRFT AAGTDKFADV TTRLATLPTY AQWISTENPT LAPNMFAMVL DNQVIGAPGV TATIPDGRAE ITGSYTRETA TALANQLNFG ALPLTFEVQS EQQISATLGS EQLEKGMIAG LIGLLLVVVY SLFQYRALGL VTVASLLIAG LVTYGMITLL SWTQGYRLSL PGVAGLIVAI GITADSFIVY FERIRDELRD GRSLTSAVDT GWDRARRTIV ASDTVNFLAA VVLYFLAVGG VRGFAFTLGL TTLVDLIVVF FFTHPLMKLL ARTRFFADGH PASGLDPHRL GATGVRYAGR GRVVTPATAA ATPGLTEDRP AEPTGKKKKK QLVPAGAATA APTMTIAERR ALAAAEAAAQ KSDAAEASDS SEAETEHDPA GTPPADDTRT DGTPASDERK DGNL
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