Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_16190 |
Symbol | |
ID | 8633255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 1812944 |
End bp | 1814620 |
Gene Length | 1677 bp |
Protein Length | 558 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | HNH endonuclease |
Protein accession | YP_003314388 |
Protein GI | 269794933 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.46252 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCCGG CTGAGGCGGG CGAGGGGTTG GCCGTGCTGG TCGACGCGGT CGTGGCGATC GAGGCTGAGA TCGCGGCGCT GTCGGCGCGT CGAGCGGCAC TGGTCGACCG CGCTCGGCGG TGGTCACGAG AGGCTACCGA CGCCGTCGCT CGGGGCCGTG GTGAGGACAG GGCACCGTTC CTGGACCATC GCCTGGCCGA GCGGTCCCTG GTCTCTGAGA TCGCGTGCGC ACTGCGCCTG CCTGAACGTT CAGCCGGGGC CCTGCTGATC GAGTCGCAGG CCCTCGTGCA CGAGCACCCC GCCACGATGG CCGCGCTGCG CGAGGGCGTG GTGTCCTACC GGCGCGCGCA GACGCTCCTC GACGCCACCA TGGGCCTGGA CGAACCATCA GTCCTCGAGC TGGACGCACT GCTGGCCCAG AAGGCCCTGA CGTTGACGGT CTCTCGCCTC AAGACGGTCG CCCGGCGTGA GCGTGAGCGC CGCGACTCCC GTCCGCTGGT CGAGCGCCAC CAGGTCGCAG CCCAAGACCG ACACGTCGAG CTGCACCCGT GCGGAGACGG CATGGCGTGG CTGCACCACC TCCTCCCCGC GGTCCAGGCC ACCGCGATCT TCCACCGGTT GACCGACATC GCGACGGCGG TCCAAGGCCC CGACGAGCCC CGCACCTTGG CCCAGCTGCG CGCCGACGCC AGCGTCGACC CGCTCCTCGA CGACGACGCA CGGGCGGCCT TGATGGCTGC ACCCTGCGAC GCCGAACAGC CACCGGCAGG TGAGACCCCC ACGGGCGGCT CGGGCAAGAG CGCAAGCGCC AGCACCGGCA CCGGCACCGG CACCGGCAGG ATGATCGACA GCAGCGCCGT GGGCACCGCC GTCATGGCTG ACACCGCGGA CCACCACACC GCCGGAGGGC CGACTCAGTC CATCGCGGGC ATCGCCGACC GCGTCTCCCT CGGTGGCATC AAGCCCCAGG TCGCGGTCAC CATCCCCGTC ATGACCCTGC TCGGTCACTC CGACGAGCCC GGCGACCTGG CCGGACACGG CCCGATCGAC GCCCACACCG CGAGGCGCCT CGCCGCCCAG GCGCCGAGCT TCCTGCGGAT CCTGACCCAC CCCGAGACCG GCACCGTCCT GTCCGTAGGC CGCGACCGCT ACGCCGTCCC CGCAGACCTC AAGTCCTGGC TGCGCATCCG CGACGAGACC TGCCGATTCC CCGGATGCTC ACGCAGAGCC CAACGCTGCG ACATCGACCA CATCAAGGAC TGGGCCCACG GAGGAACCAC CGACCACCAC AACCTCATCC ACCTGTGCCG CAACCACCAC CGTTTGAAGC ACACCACCAG CTGGACCGTC CGCACCGAAC CACCAGGTGT CGGGACCGGG CCGCCGGGCA CGGGCAGCCG GACGCCCGGC GGTTCGTCGA CCGGTCCGCC CGCGAGGAAG GCGACCAGCC CACCTGACGG GCCCTCGTCA GGCCGGGACT CACCTCACCG CGCCCGAGCG CACGACGGCG TTGCCCCCTC CGCCGACATC GTGCACTGGA CCGCGCCCTC AGGGCGGACC TACCTCGACC ATGCCGCCAC GACGATCACG CAGGACCAGG GGAGGACGGC TGACGAGCGC GGGCGTGCCC CGGCTGGAGG TGACCCGTCT CCGTTCCCCG ACGAGCCGCC GTTCTGA
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Protein sequence | MTPAEAGEGL AVLVDAVVAI EAEIAALSAR RAALVDRARR WSREATDAVA RGRGEDRAPF LDHRLAERSL VSEIACALRL PERSAGALLI ESQALVHEHP ATMAALREGV VSYRRAQTLL DATMGLDEPS VLELDALLAQ KALTLTVSRL KTVARRERER RDSRPLVERH QVAAQDRHVE LHPCGDGMAW LHHLLPAVQA TAIFHRLTDI ATAVQGPDEP RTLAQLRADA SVDPLLDDDA RAALMAAPCD AEQPPAGETP TGGSGKSASA STGTGTGTGR MIDSSAVGTA VMADTADHHT AGGPTQSIAG IADRVSLGGI KPQVAVTIPV MTLLGHSDEP GDLAGHGPID AHTARRLAAQ APSFLRILTH PETGTVLSVG RDRYAVPADL KSWLRIRDET CRFPGCSRRA QRCDIDHIKD WAHGGTTDHH NLIHLCRNHH RLKHTTSWTV RTEPPGVGTG PPGTGSRTPG GSSTGPPARK ATSPPDGPSS GRDSPHRARA HDGVAPSADI VHWTAPSGRT YLDHAATTIT QDQGRTADER GRAPAGGDPS PFPDEPPF
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