Gene Sked_15100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_15100 
Symbol 
ID8633146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1693483 
End bp1695933 
Gene Length2451 bp 
Protein Length816 aa 
Translation table11 
GC content73% 
IMG OID 
Productfamily 31 glycosyl hydrolase, alpha-glucosidase 
Protein accessionYP_003314280 
Protein GI269794825 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACC ACCAGACCAC CAGCACCGAG CACCTGAGGG CCGCCGACCC CCGCGCCGTC 
GTCCAGGGGC CCGGGTACCG CATCACCGTC CTCACCAGCC GTATGCTCCG CCTCGAGCAC
AGCCCCGACG GCACCTTCGA GGACCGCCCG ACGCAGCTCG TCCGGGACCG TGCCTTCGAC
GTCCCCGAGT TCGGCGTCCG CGAGACCGAG ACCGGCCTCG AGCTGTGGAC CGAGCACCTC
CACCTGCGCT ACGACCGCGG CCCCTTCACA CCCTCCGGGC TCGCCGTGTC CATGCGGCAG
AAGGCCCAGG GCGCGCACTT CACCACCTGG ACCTACGGCG ACCCCGCCTG GGGCACCGGT
GCCCACCCGT CCAACCTCGG CGGCACGGCC CGGACCCTCG ACGACGTCGA CGGCGCGACG
CCGATCGAGA CCGGCCTGCT CTCCACGGAC GGCTACACCG TCGTCGACGA CTCCACCAGC
CTCGCCCTCG ACGCCACCGG GTGGCCCGTG CCGCGCGAGG GCGGCGACGA CCTGTACTTC
TTCGGCTACG GACGTGACTT CACCGACGCG CTCGCGGACT GGTTCCGACT CACCGGGCCG
AGCCCGATGC TCCCGCGCTG GACGCTCGGC AACTGGTGGA GCCGGTTCCA CGACTACACC
ACCGACAGCT ACCTGGCCCT CATGGACCGG TTCGCCGACG AGGGCATCCC GTTCTCGGTC
GCGGTGATCG ACATGGACTG GCACGTGACC GACATCGACC CGGCGATCGG CTCGGGCTGG
ACCGGCTACA CCTGGAACAC AGAGTTCTTC CCCGACCCCG AGGCGTTCCT CCGCGGCCTC
CACGACCGCC ACCTGCGGAC CGCGCTCAAC GTGCACCCGG CCGACGGGGT CCGTCGCCAC
GAGGACGCCT ACGTCGCCAT GGCCACCGAG CTCGGTCTCG ACCCCGAGGC CGGCGCGGCC
ATCGGCTTCG ACATCGGGTC GCGGGCCTTC GCCGACGCGT ACCTGCGGCA CCTGCACCAC
CCGCACGAGG AGATCGGCGT CGACTTCTGG TGGCTCGACT GGCAGTCGGG ATCGGCCAGC
CGCACGGCCG GCCTCGACCC GCTGTGGGCG CTCAACGAGC TGCACTACGC CGACTCCGGC
CGGGACGGCG AGCGACCGCT GACCTTCTCC CGGTACGCGG GCCTCGGCAG CCACCGCACG
CCCGTCGGGT TCTCGGGCGA CACGATCGCC ACCTGGGACT CCCTCGCCTT CCAGCCGCGC
TTCACGTCGA CGGCCGCGAA CGTCGGCTAC TTCTGGTGGA GCCACGACAT CGGCGGGCAC
TTCGGCGGCG CGCGTGACGA CGAGCTCTCC GCCCGCTGGT ACCAGTTCGG TGCCTTCTCG
CCCGTGAACC GCCTGCACTC CTCCAAGAGC CCCTTCGGGT CCAAGGAGCC GTGGCGGTTC
ACCGAGCCGG TGCGACGCGT CATGACGGAG TTCCTCCGCC TGCGCCACCG CCTGGTCCCG
TACCTCTACA CGGCCATGTG GGACTCCCGC ACCCACGGCG TGGGCCCGGT CCGCCCGATG
TACCACGACC ACCCGCGCGA GCAGCGGGCC TTCGAGGTCC CAGACCAGTA CATGTTCGGC
GCGGACCTCC TGGTGGCGCC CGTCGTGGTC CCGCTCGACG CGCAGACCCG CCTCGCCGCC
GTCCCGGTCT GGCTGCCCGC GGGGGAGTGG GTCGACGTCT TCACCGGTCG CCGGTACGAC
GGCGGCCGCG ACCTCGTGGT CCACCGCAGC CTCGAGCAGA TGCCCGTCTT CGCCCGGGCC
GGGTCGCTCG TCGTCCTCGC CGACGACCTC ACCGCCGACA CCGGTGCCCG TGCCGAGTCG
GTCCTCGTGC GCGTCTTCCC CGGGGCCGAC GGCACCACGC GCCTCGTGGA GGACGACGGC
CAGGCCCGCC CGGGCCTCGC CGACCAGCAG GTGACGGTCC TGCGGCAGAC CTCTACGGAC
GACGAGACCG CCGGCACCAC CTCGGTCGTC GTCTCGGTCG ACGTGCCGAC CGGGCCCGGC
GTCCTGCTGC ACCGCACCGT GCGCGTCGAG CTCGTCGGGG TGGCCGACGT CGCCTCCGCG
GTCGTCCGCA CTGTGGGCGG CGAGGCCAGC GTCAGCGTCG AGCCGGGGGA GACGGGGGCG
GTGCTCGACC TCGGGACCGT CGACCTGACC GAGGGGCTGA CGCTCACCCT CGACGACGTC
CGCCAGGCTC CCCGCGACCT GGAGGCCGCG TTCTTCACGA TCGTGGACGA CGCCCTCGTC
GCCTACGACC TCAAGCGCGC CGTCATGGAC GCGCAGTCGG CACTCGACGG CGCGGCCCTG
ATCGCCGCCC TGCATCGCCT CGACCTGCCG GGGAACCTCT TCGGCGCCCT CGTGGAGCAG
GTCGCCGCGA CCACCGGCAC CGGGGCGGAC ACCAGGAGGG TGAACCCCTA G
 
Protein sequence
MSDHQTTSTE HLRAADPRAV VQGPGYRITV LTSRMLRLEH SPDGTFEDRP TQLVRDRAFD 
VPEFGVRETE TGLELWTEHL HLRYDRGPFT PSGLAVSMRQ KAQGAHFTTW TYGDPAWGTG
AHPSNLGGTA RTLDDVDGAT PIETGLLSTD GYTVVDDSTS LALDATGWPV PREGGDDLYF
FGYGRDFTDA LADWFRLTGP SPMLPRWTLG NWWSRFHDYT TDSYLALMDR FADEGIPFSV
AVIDMDWHVT DIDPAIGSGW TGYTWNTEFF PDPEAFLRGL HDRHLRTALN VHPADGVRRH
EDAYVAMATE LGLDPEAGAA IGFDIGSRAF ADAYLRHLHH PHEEIGVDFW WLDWQSGSAS
RTAGLDPLWA LNELHYADSG RDGERPLTFS RYAGLGSHRT PVGFSGDTIA TWDSLAFQPR
FTSTAANVGY FWWSHDIGGH FGGARDDELS ARWYQFGAFS PVNRLHSSKS PFGSKEPWRF
TEPVRRVMTE FLRLRHRLVP YLYTAMWDSR THGVGPVRPM YHDHPREQRA FEVPDQYMFG
ADLLVAPVVV PLDAQTRLAA VPVWLPAGEW VDVFTGRRYD GGRDLVVHRS LEQMPVFARA
GSLVVLADDL TADTGARAES VLVRVFPGAD GTTRLVEDDG QARPGLADQQ VTVLRQTSTD
DETAGTTSVV VSVDVPTGPG VLLHRTVRVE LVGVADVASA VVRTVGGEAS VSVEPGETGA
VLDLGTVDLT EGLTLTLDDV RQAPRDLEAA FFTIVDDALV AYDLKRAVMD AQSALDGAAL
IAALHRLDLP GNLFGALVEQ VAATTGTGAD TRRVNP