Gene Sked_13260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_13260 
Symbol 
ID8632962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1491463 
End bp1492359 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content76% 
IMG OID 
ProductdegV family protein 
Protein accessionYP_003314100 
Protein GI269794645 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.756128 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGAG ACCGCACGAC CGAGGCCGCG TCGGCGACTG CTGACGCGGC CTCGGGCCGT 
GTGGTGGTCG TGACCGACTC GACGGCCTCG CTGCCTGCCG GGCTCGCTGC TGCGCACGGC
GTGCTCGCGG TGCCGCTCGT CGTGGTGGTC GACGGCGTGG CCCACCACGA GGGCGTCGAC
CTCGGACCCG AGGGCCTCGT GGCCGCGCTG TCGCGCCGGG CCGAGGTCAC CACCTCGCAA
CCCGCGCCGG AGGCCTTCCT GGACGCGTAC CGGGAGGCGG CACGCTCGGG GGCTTCACGG
GTCGTGTCGG TGCACCTGTC GGGGGAGCTG TCCGGGACCG CGCGGGCCGC GTCGTTGGCT
GCCCGCACCA GCCCGGTCCC CGTTGACGTC GTGGACTCCC GGAGCGTCTC GACCGGTCTC
GGGCTCGCCG CTCTGGCTGC TGCTCGCGTG GCGGCGAGCG GCGCTTCGGC GGCCGAGGTC
GTCGCGGTCG CAGAGCGGGT GGCGGCGAGC ACGACCGCGC TGTTCGTGGT CGACTCCCTC
GACCACCTGC GGCGGGGCGG GAGGCTCAGC GCTGCCGCGG CGGCGCTCGG GACAGCCCTG
GGGTTGCGCC CTGTGCTCGG GCTGCGTGAC GGTCGGATCG AGGTGGTCCA GAAGGTGCGT
ACCCGTGGGG CGGGCGCCGA CAGGCTCGTG GAGGCTGCGG TGGCCGCGCT CGGGACCTGC
GCGTCGCCGC GCTTCGCGGT CCACCACCTC GGCGACGACA CCGCCGCCGT CGCGTGCGCG
CTCCGCATCG AGGAGGCGAC CGGCCGCCAG GTGCTCGTCT CGCCCGTGAG CGCGGTGCTC
GGGGCCCACG TGGGGCCGGG ACTGCTCGCG CTGGTGTCGG TGGACGACCC CGAGTAG
 
Protein sequence
MAGDRTTEAA SATADAASGR VVVVTDSTAS LPAGLAAAHG VLAVPLVVVV DGVAHHEGVD 
LGPEGLVAAL SRRAEVTTSQ PAPEAFLDAY REAARSGASR VVSVHLSGEL SGTARAASLA
ARTSPVPVDV VDSRSVSTGL GLAALAAARV AASGASAAEV VAVAERVAAS TTALFVVDSL
DHLRRGGRLS AAAAALGTAL GLRPVLGLRD GRIEVVQKVR TRGAGADRLV EAAVAALGTC
ASPRFAVHHL GDDTAAVACA LRIEEATGRQ VLVSPVSAVL GAHVGPGLLA LVSVDDPE