Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_13150 |
Symbol | |
ID | 8632951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 1478112 |
End bp | 1479872 |
Gene Length | 1761 bp |
Protein Length | 586 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | beta-galactosidase |
Protein accession | YP_003314089 |
Protein GI | 269794634 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.252199 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGATCG GCGAGACCGA CTTCCTCCTC GACGGCAAGC CCTTCCGCAT CCTCTCGGGG GCGCTGCACT ACTTCAGGGT CCACCCGGAC CTGTGGGCCG ACCGGATCCA CAAGGCCCGC CTCATGGGCC TCAACACCAT CGAGACCTAC GTGCCGTGGA ACGCGCACGC GCCGCAGCGC GGGGAGTTCC GGACGGACGG CGCGCTCGAC CTCGAGCGGT TCCTGCGGCT GGTCGAGGCC GAGGGCATGC TCGCGATCGT CCGCCCCGGG CCGTACATCT GCGCGGAGTG GGACAACGGC GGGCTCCCGG GCTGGCTGTT CCGCGACCCT GCGGTCGGCG TGCGACGCGA CGAGCCCCTC TACATGGAGG CGGTCTCGGA GTACCTCGGG ACGGTCCTCG ACCTCGTGGC GCCGTTCCAG GTGGACCGCG GCGGGCCGGT GGTGCTGGTG CAGGTCGAGA ACGAGTACGG CGCGTACGGC TCCGACCACG TGTACCTCGA GAAGCTCATG GCGCTCACCC GGTCGCACGG CATCACGGTG CCGCTGACCA GCATCGACCA GCCGAGCGGC ACCATGCTCG CCGACGGGAG CATCGACGGG CTGCACCGGA CGGGGTCCTT CGGGTCCCGC AGCGCCGAGC GGCTCGCGAC CCTGCGCGAG CACCAGCCGA CGGGTCCGCT CATGTGCGCG GAGTTCTGGG ACGGGTGGTT CGACCACTGG GGTGCGCACC ACCACACCAC GTCGGCGCAG GACGCGGCCC GCGAGCTCGA CGAGCTGCTC GCCGCCGGGG CGTCGGTCAA CATCTACATG TTCCACGGCG GCACGAACTT CGGCTTCACG AGCGGAGCGA ACGACAAGGG CGTCTACCAG CCGACGACCA CCTCGTACGA CTACGACGCC CCGCTCGCCG AGGACGGCTA CCCGACGGAG AAGTTCTTCG CCTTCCGCGA GGTGATCGCC CGGTACGCAC CGGTGCCCGA CGAGCCGCTG CCCGAGCGCA GGCCGGCGCC CCTCCCGACG GTCGAGCTGG AGTTCTCGCT CCCCGTGCTC GACGCCGCCG AGCGGCTCGG GTCGTGGACG GCGTCCGAGC ACGTCCCGAC GACCGACGAG GTCGACTCGT TCACGGGCTT CGCGCTGTAC CGCACGACGC TCGCGGCCGC GCAGGAGCGG GTCCTGTCGG TCGGCGAGGT CCGCGACCGG GCGCTCGCGC TGCTCGACCG GGCGCCGGTG GGCACCCTCG ACCGGGCCCG GCACGAGCGG ACGCTGACGC TCCCCGGCGG CCCGGAGGCC CTGCTCACCC TCCTCGTCGA GGACCAGGGG CGGGTGAACT ACGGTCCGCG CCTGGGCGAG CACAAGGGGC TCGTCGGGCC CGTGACGGTC GGGGGCGCCG AGGTCACCGG GTGGGAGATC CTGCCGCTGG ACCTCGACGA CGTGACCCCG CTCGTCGACG CCGTCCGGGC GGTCGGCGCT CCCGTGGTCA AGGGCGGCGC CGTGGCCGGG CCGGCCTTCG TGTCCGGCAG CATCGAGCTC GACGAGCCGG CCGACCTCTT CCTGTCGGCC GCGCGCCTGG GCAAGGGTGT CGTGTGGGTC AACGGCTTCA ACCTCGGCCG CTACTGGAGC GCCGGCCCGC AGCAGACGCT CTACGTCCCG GGGCCGCTCC TGGTGCCCGG ACGCAACACC GTGCTGGTGC TGACCCTCGA CGGCCTCGAC GAGGTGCCGG TCTTCGTGGA CGGGCTCGAC CTCGGGCACG AGGAGCAGTA G
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Protein sequence | MEIGETDFLL DGKPFRILSG ALHYFRVHPD LWADRIHKAR LMGLNTIETY VPWNAHAPQR GEFRTDGALD LERFLRLVEA EGMLAIVRPG PYICAEWDNG GLPGWLFRDP AVGVRRDEPL YMEAVSEYLG TVLDLVAPFQ VDRGGPVVLV QVENEYGAYG SDHVYLEKLM ALTRSHGITV PLTSIDQPSG TMLADGSIDG LHRTGSFGSR SAERLATLRE HQPTGPLMCA EFWDGWFDHW GAHHHTTSAQ DAARELDELL AAGASVNIYM FHGGTNFGFT SGANDKGVYQ PTTTSYDYDA PLAEDGYPTE KFFAFREVIA RYAPVPDEPL PERRPAPLPT VELEFSLPVL DAAERLGSWT ASEHVPTTDE VDSFTGFALY RTTLAAAQER VLSVGEVRDR ALALLDRAPV GTLDRARHER TLTLPGGPEA LLTLLVEDQG RVNYGPRLGE HKGLVGPVTV GGAEVTGWEI LPLDLDDVTP LVDAVRAVGA PVVKGGAVAG PAFVSGSIEL DEPADLFLSA ARLGKGVVWV NGFNLGRYWS AGPQQTLYVP GPLLVPGRNT VLVLTLDGLD EVPVFVDGLD LGHEEQ
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