Gene Sked_12560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_12560 
Symbol 
ID8632892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1425339 
End bp1426934 
Gene Length1596 bp 
Protein Length531 aa 
Translation table11 
GC content75% 
IMG OID 
Productcarboxylesterase type B 
Protein accessionYP_003314032 
Protein GI269794577 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.982249 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACCA GCAGCACCAC GACCACCGGG CAGCGCCGCA CGCTCGACGC GCACGACACC 
GACGGGCTCG TGGTGCGCAC CGTCGCCGGG CAGGTGGAGG GCCGCACCCA ACCGGTGCGG
GAGGGCGAGT GCCGCGTCTG GTTCGGGGTG CCCTTCGGTG ATCTCCCGCC CGACAGCACC
CGTTTCCGGG CAGCGAGCGA GCCGCAGCGG TGGACGGGCG TCCGCGACTG CGTGACCTCG
GGGCCGCGCG CACCACAGGC CGACCGCCCC GGTGACGTCA GAGCGGCCAG TCACCCGCAG
AGCGAGCGAG ACTGCCTCAC CGTCAACGTC TGGGCGCCGC CGGCCTCGCG TGGCGGCGGG
CACCCGGTGC TCGTGTGGTT CCACGGGGGC GGTTTCACTG GCGGGTCGAC GGCGGACCCG
TCCGCCGCGG GCGACGTGCT CGCCGCCGAG CACGACGTCG TGGTCGTGCA CGCCGCCTAC
CGCCTGGGTG TGCTCGGCGC GCTCACGCTC GACCACCTGC TCGGAGACGC CTTCGCGCGC
TCGGGCAGCG CGGGGCTGGG CGACCAGGTC CAGGCGCTGC GGTGGGTCCG GGAGAACATC
GAGGAGTTCG GCGGCGACCC GGGCTCGGTG ACGATCGCGG GGGAGTCGGC TGGCGGGAGC
TCGGTCTCGA CGCTTCTCGG CACGCCGGCC GCGCTCCCGC TCGTGCACCG CGGCATCGTC
CAGAGCGGAC CGCACCGCGC CGTCTCCCGC GAGCAGGGGA TCGAGACCAC CGACCGGGTG
CTCGACGCTC TCGGGCTCCG ACGCGCGGAC GCCGGCACGC TGCTCGGCGC GCCGGTCCGC
GACCTGCTCC GGGCGCAGGG TGCCGTGCTG GCAGACCTGG CGCGGAGCGC ACCGAGCGAG
CGGGTCGTGC CGTTCGTGCC GGTGATCGGC AGCGACCTCC TCCCCGCCGA CCCGGCCGGA
GACGGCACCC ACTTCGCCGA CGGCATCGAC CTGCTCGCCG GGACGGCCCT CGACGAGGCA
GCGCTCTTCC TCTTCGGAGC ACGAGGGCGA TCCGGCGAGG ACAACCAACG GACCCTCGAC
GACCTGCTCG CCCGTCAGCC TGCCCCGGAC GCCGCGGTCA CCTGGGCGGC AGCCTTCGAG
GCGGACACCA GGACCGCTGC GACCGGATAC CCCGCGCTCG AGGCGTACCT CACCGACCTG
TACTACAGGG CCGGTACGGA CCGTCTGCTC GACTCCCGGG TGTCGGCGCA GGGGTCGACG
TCGGCGTACC TGTTCACCTG GCGCAGCGAC GCCGTGCCGG AGCTGGGTGC CGCGCACTCG
ATCGAGACGC CGTTCGTCTT CGGCCACCTC GACCGCGGCA CCACCCGGGA CCTCGTCGGT
CCGGACGCCC CGCGTGACCT CTCGCAGGCG ATGACGGAGG CGTGGGCGAC CTTCGTGCAC
ACCGGGCGGC CCGCCGCCGC AGGCCTCCCG GACTGGCCCG AGCACGACCC ACGGCGACGC
GCGACGATGC TGCTCGGCAG CGAGAGCACG GTCGTCGACG ACCCCCGACC GCACCTGCGC
CGGTGGTGGC GGGAGGCGGA GGTGCCGCGG GTCTGA
 
Protein sequence
MATSSTTTTG QRRTLDAHDT DGLVVRTVAG QVEGRTQPVR EGECRVWFGV PFGDLPPDST 
RFRAASEPQR WTGVRDCVTS GPRAPQADRP GDVRAASHPQ SERDCLTVNV WAPPASRGGG
HPVLVWFHGG GFTGGSTADP SAAGDVLAAE HDVVVVHAAY RLGVLGALTL DHLLGDAFAR
SGSAGLGDQV QALRWVRENI EEFGGDPGSV TIAGESAGGS SVSTLLGTPA ALPLVHRGIV
QSGPHRAVSR EQGIETTDRV LDALGLRRAD AGTLLGAPVR DLLRAQGAVL ADLARSAPSE
RVVPFVPVIG SDLLPADPAG DGTHFADGID LLAGTALDEA ALFLFGARGR SGEDNQRTLD
DLLARQPAPD AAVTWAAAFE ADTRTAATGY PALEAYLTDL YYRAGTDRLL DSRVSAQGST
SAYLFTWRSD AVPELGAAHS IETPFVFGHL DRGTTRDLVG PDAPRDLSQA MTEAWATFVH
TGRPAAAGLP DWPEHDPRRR ATMLLGSEST VVDDPRPHLR RWWREAEVPR V