Gene Sked_11730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_11730 
Symbol 
ID8632809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1358084 
End bp1358767 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003313950 
Protein GI269794495 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.259328 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.299727 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCAC GCACCACGCA CCCCGCTCGC CCCGCCGCTG CGCCGAGCCT GCCCGCTCCG 
CGCCTGTCGC AGCGCAGGAG CGTCCCGTCC CTCGCCCTCG CCGTCGCGTC GTTGGTCGTC
CTCGCCGGGT GCTCCACCGC CGACGCCGAC CAGCCGGCCG CGTCGGGAGC CTCTGCCGGA
GACTCCGTGA CCGTCGACGA CGCCTGGGTC AAGGCTGCTG ACAGCGGCAT GTCTGCCGCC
TTCGGCGACC TCACCAACAC CGGGACGGAC GACGTCACCG TCGTGTCCGT CACCTCGCCC
GCCTCGACCG CCCTCGAGCT CCACGAGACG GTCGAGAACG AGAGCGGCGC GATGGTCATG
CGCGAGAAGC AGGACGGGTT CACCATCCCC GCCGGCGGCG AGCTGCTGCT CGAGCCTGGC
GGCAACCACA TCATGCTCAT GGACCTCACC GAGCCGCTCG TCGCCGGTGA CGAGGTGACG
GTGACGCTCA CCTTCTCCGA CGACTCGACC CTCGACCTCA CCGCCCCCGT CAAGGACTAC
GCGGGCGCCA ACGAGAGCTA CGAGGGCGGA GAGGGCGACG ACGACATGGA GGGGATGGAG
GGCATGGACC ACGGCGACGC GGGGTCCAGC ACCGACCACG ACGGCTCTGA CCACTCCGAG
CACACCGGCA CGGACGACGA GTGA
 
Protein sequence
MSARTTHPAR PAAAPSLPAP RLSQRRSVPS LALAVASLVV LAGCSTADAD QPAASGASAG 
DSVTVDDAWV KAADSGMSAA FGDLTNTGTD DVTVVSVTSP ASTALELHET VENESGAMVM
REKQDGFTIP AGGELLLEPG GNHIMLMDLT EPLVAGDEVT VTLTFSDDST LDLTAPVKDY
AGANESYEGG EGDDDMEGME GMDHGDAGSS TDHDGSDHSE HTGTDDE