Gene Sked_07950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_07950 
Symbol 
ID8632432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp906168 
End bp907217 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content71% 
IMG OID 
ProductABC-type Fe3+-hydroxamate transport system, periplasmic component 
Protein accessionYP_003313581 
Protein GI269794126 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0346758 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.343375 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGC TCTTCTCCGG GCAGCGTCGC GCTGCCTCCC TCGCCGTCGC GGCCCTCGCC 
GCGACCGCTC TCCTGGCCGG CTGCTCGTCG ACCGACGACG CCGCTGACGC CGCCACCGGC
ACCGCTGGCG CGACGACGAG CACGACCGCC GTCGCCCTCG CCGAGGACGG AGCCTTCCCG
GCGACCGTCG AGCACGCCTA CGGGTCGACG ACCATCGAGA CCGAGCCGCA GCGCATCGTC
ACCATCGGCT GGAGCGCGCA GGACGCGGTG CTCGCCCTCG GTAAGGTGCC CGTCGGCATC
GAGCGCTTCA CCGGCAGCGG GATCGTCGAC GACATCCTCC CGTGGGACAC CGACTACTTC
GTCGACGCCA CCCCGACGCT GCTCACCTCG AACCCCGAGG TGCCCTTCGA GCAGATCATG
GCGCTCGAGC CCGACGTGAT CATCGCGGTG TACTCCGGCA TCGAGCAGTC GGACTACGAC
CGTCTCACCG AGATCGCGCC GACCGTCGCG TTCCCCGAGG TCGCCTGGTC CACGCCCTGG
CAGGACCAGA CCACCATGAT CGGCGCCGCC CTCGGGCAGC CGGCCCGCGC CGACGAGCTC
GTCGCCGGGA TCGCCGACAC CCTCGCCGCC ACCCGCGAGG CGAACCCCGA GCTGGCCGGC
AAGACCGTCA CGTACGCGAT GGCGGGCGAG GACGTCATCG TGTTCTGCCC CAACGACCCC
CGCATCGAGA TGCTCGTCGA GATCGGCATG GTCCCGTCGG CCGGCACCGA GCAGGCCTGC
GCCGGTGACG ACGCGTCCTC GGTGATCGTC AGCCCCGAGC TCGTCGACAC CCTCGACGCC
GACGCGTTCA TCCTCGTGGA CGTCGACGAC ACCGTCCTCG ACCAGCTCAT GCAGGACGAC
CTCTTCGCGG GCCTGCCGGC CGTGGCCGAC GGCCGCGTCA TCCAGATGAT CGGCATGGAC
TACGCCATGG CGACCTCTGC CCCGACCGTC CTGAGCATCC CCTACGCCCT CGACGAGTTC
GTCACCCAGC TCACCGACAT CCTCGGCTGA
 
Protein sequence
MTTLFSGQRR AASLAVAALA ATALLAGCSS TDDAADAATG TAGATTSTTA VALAEDGAFP 
ATVEHAYGST TIETEPQRIV TIGWSAQDAV LALGKVPVGI ERFTGSGIVD DILPWDTDYF
VDATPTLLTS NPEVPFEQIM ALEPDVIIAV YSGIEQSDYD RLTEIAPTVA FPEVAWSTPW
QDQTTMIGAA LGQPARADEL VAGIADTLAA TREANPELAG KTVTYAMAGE DVIVFCPNDP
RIEMLVEIGM VPSAGTEQAC AGDDASSVIV SPELVDTLDA DAFILVDVDD TVLDQLMQDD
LFAGLPAVAD GRVIQMIGMD YAMATSAPTV LSIPYALDEF VTQLTDILG