Gene Sked_07740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_07740 
Symbol 
ID8632411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp881652 
End bp883232 
Gene Length1581 bp 
Protein Length526 aa 
Translation table11 
GC content73% 
IMG OID 
Productpentulose/hexulose kinase 
Protein accessionYP_003313561 
Protein GI269794106 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0607803 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCGCG ACGACATGAC GCCGACCAGC AGCCAGGACC CCGCCCAGCC GGCCACGTCT 
CACGACCAGG TGGTCGTCGG TGTCGACATC GGCACCACGG GGACCAAGGC CGTCGCCTAC
GACGCCACCG GGCTGGCGCT CGCCCACGCG ACCGTCACCT ACCCTCTCGA CAGCCCGCAC
CCCGGCTACG CCGAGCAGGA CCCCGAGGTG ATCCTCGAGG CCGTCCGCCA GACGGTGCGC
GACGTCGTCG CCGAGCTGCG CGAGACCGAC GGCCGCGAGG TCGTCGGCCT GGCCTTTAGC
TCGGCCATGC ACTCGCTCAT CGGGCTCGAC GCCGAGCAGC AGCCGATCAC CCCGTCGACC
ACCTGGGCCG ACACCCGGGC CGACGCGCAG GCCGAGCGCC TGCGCGCGAC CCCTGAGGGG
CTCGAGCTGC ACCGCCGGAC GGGGACCCCC GTCCACCCCA TGTCGCCGCT CGTGCGCCTC
GTGTGGTTCC GCGAGGAGGA GCCCGCGACG CACGCCGCCG TCGACCGCTG GTGCGGGATC
AAGGAGTACG TCCTGCTGCG CCTGAGCGGC GAGCTGGTCA TGGACCTGTC GATCGCGTCC
TGCTCCGGGC TGCTCGACAT CCACCAGGAG CGCTGGGACG ACGAGGCTCT GACACTGGCC
GGCATCACCG CCGCGCAGCT GCCCACGGTG GTCCCGACCA CCCACGTGCT CCCCCTGCTG
GACGACGAGG CCCACGGGAT GGGCCTGACC GCAGGCACCG CTCTGGTGGT CGGCGCCGGC
GACGGCCCGC TCGCCAACCT CGGTGTCGGT GCGGTGCGCC CCGGGATGGT CGCCTGCTCC
CTCGGCACCT CCGGTGCGCT GCGCGTCGTC GTCGACAAGC CCGTGGTCGA CCCGTCGGGG
AGGGTGTTCT GCTACGCCCT CGCCCCGGGC CTGTGGGTGG TGGGCGGTGC GATCAACAAC
GGCGGCATCG TCATGCGCTG GGCCCTCGAC GCCCTGGCGC CCGACCTCGG CGAGGACGGC
GAGGAAGCAC TGCTGGCCCT CGCCGCGACG GCTCCCGTGG GCTCCGGCGG GCTGCTCATG
CTGCCCTACC TGCTCAGCGA GCGCGCCCCG CGGTGGTCCT CGCTCCCACA GGGCGTGTAC
GTCGGGCTCA ACCGCACGCA CAGCCGCGAG CACATGGTCC GCGCCACCAT CGAGGGCGTC
TGCCAGCAGC TGTCCCTCGT CCTCGACTCC ATGCGCGACG CGGGGCTCGA GATCACCACG
ATCCGGGCGA CCGGGGGAGT GGTCCGCAGC CCGCTGTGGC GCCAGGTGCT CGCCGACACC
CTCGACTCCC CGATCGACCT CACCGAGGGC CAGGAGGGCT CGAGCTTCGG CGCCGCGATC
CTCGGCATGG CGGCCCTCGG GCTGGTGGAC TCCATCGAGC AGGCCGGGGC GTCCTCCACC
GTCGTCGAGA CCGTCGAGCC CGACCCCGCG TCGGCGGCGG TGTACGCACG GCTGCGCCCG
GTGTTCGCCG GGCTCTACGA CGCACTCGTC CCGACCTTCG AGGCGCTGCG CGAGATCGCT
CCCGAGCTGC CGACGGAGTA G
 
Protein sequence
MSRDDMTPTS SQDPAQPATS HDQVVVGVDI GTTGTKAVAY DATGLALAHA TVTYPLDSPH 
PGYAEQDPEV ILEAVRQTVR DVVAELRETD GREVVGLAFS SAMHSLIGLD AEQQPITPST
TWADTRADAQ AERLRATPEG LELHRRTGTP VHPMSPLVRL VWFREEEPAT HAAVDRWCGI
KEYVLLRLSG ELVMDLSIAS CSGLLDIHQE RWDDEALTLA GITAAQLPTV VPTTHVLPLL
DDEAHGMGLT AGTALVVGAG DGPLANLGVG AVRPGMVACS LGTSGALRVV VDKPVVDPSG
RVFCYALAPG LWVVGGAINN GGIVMRWALD ALAPDLGEDG EEALLALAAT APVGSGGLLM
LPYLLSERAP RWSSLPQGVY VGLNRTHSRE HMVRATIEGV CQQLSLVLDS MRDAGLEITT
IRATGGVVRS PLWRQVLADT LDSPIDLTEG QEGSSFGAAI LGMAALGLVD SIEQAGASST
VVETVEPDPA SAAVYARLRP VFAGLYDALV PTFEALREIA PELPTE