Gene Sked_06480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_06480 
Symbol 
ID8632285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp738675 
End bp739715 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content76% 
IMG OID 
ProductABC-type Fe3+-siderophore transport system, permease component 
Protein accessionYP_003313442 
Protein GI269793987 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.368243 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCGC ACGTCGACGC ACCCGAGCAG GGCCGGACCG TCGCGTCCGG CCCTGCTCGG 
CCCTGGGGGC TGGGCGCCGG CCTCGTGCTC GCGGTCGCGC TCGCAGCGCT CGTCGCCGGG
CTGAGCCTCG CCGTCGGCAG CAACCAGCTG CCCCTGAGCA CGGTCTGGCG CGGCCTGTTC
GCGCCCGACG ACACCTTCGA GGCGACGGTC ATCGCGTCCC GGGTGCCGCG CACCGTCCTC
GGTCTGCTCG TCGGCGCCGC CCTCGCGGTG TCGGGCGCGC TCATGCAGGG CATCACCCGC
AACCCGTTGG CCGACCCGGG CCTGCTCGGG GTCAACACCG GGGCCTCGGC CGCGATCGTG
GCCGGGACCG TCGCCTTCGG TGCGCTCGGG CAGCGCAGCA TCTTCTTCGC GCTCCCGGGC
GCGTTCGTCG TCGCCGTGGT CGTCTACGCG ATCGGGTCTG GCCGGACCGG CCCGACCCCG
GTGCGCCTGG TGCTCGCGGG CGCGGCCATC GGCGCGGTGC TGTCGGCAGC GATCCAGGCC
GTCACGCTCA CCAACCCCGA GGTGTTCGAC AGCTACAGGT TCTGGGTGGT GGGCTCGCTC
GCCGGGCGCC CGGCCTCGAC GGTCGACATG GTCTGGCCGA TCATCCTCGT CGGCCTGCTC
GCCGGGCTCG CGCTCGGGCG ACCGCTCAAC ACCCTGGCCC TCGGCGACGA GACAGCCCGC
GCCGTCGGCG GCAACGCCGG GCGCACCCGC CTCCTCGGGG CCCTCGTGGC GACCCTCCTC
GCCGGTGCCG CGACCGCGGC CGTCGGCCCC ATCGCCTTCG TCGGCCTCGC CGTGCCGCAC
ATCGTGCGGA CCATCACCGG GTCCGACTAC CGCTGGCTCG TCGCGTACTG CGTCGCGCTC
GGCCCCGTGC TCCTGCTCGG CGCCGACGTC CTCGGGCGCG TGGTCGCCCG GCCCGGCGAG
CTCATGGTCG GGGTGGTGAC CGCCTTCGTG GGCGCCCCCT TCCTCTACGT GGCCGTCCGC
AGGTCCGGGA GCGGGCTGTG A
 
Protein sequence
MTAHVDAPEQ GRTVASGPAR PWGLGAGLVL AVALAALVAG LSLAVGSNQL PLSTVWRGLF 
APDDTFEATV IASRVPRTVL GLLVGAALAV SGALMQGITR NPLADPGLLG VNTGASAAIV
AGTVAFGALG QRSIFFALPG AFVVAVVVYA IGSGRTGPTP VRLVLAGAAI GAVLSAAIQA
VTLTNPEVFD SYRFWVVGSL AGRPASTVDM VWPIILVGLL AGLALGRPLN TLALGDETAR
AVGGNAGRTR LLGALVATLL AGAATAAVGP IAFVGLAVPH IVRTITGSDY RWLVAYCVAL
GPVLLLGADV LGRVVARPGE LMVGVVTAFV GAPFLYVAVR RSGSGL