Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_05610 |
Symbol | |
ID | 8632198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 626197 |
End bp | 628278 |
Gene Length | 2082 bp |
Protein Length | 693 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | serine/threonine protein kinase |
Protein accession | YP_003313355 |
Protein GI | 269793900 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.850356 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.365615 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCGCCC GCCGTCAGCC CTCGATCCCG CCCAAGATCC CGGGCTACGA GTTCGTGCGG CTGCTCGGCA TGGGTGGTTT CGCCGACGTG TTCGAGTACC GCCAGGAACT GCCGCGTCGG TCCGTCGCCG TCAAGGTGCT GCTGTCGGGG TCGCTCGACC AGGAGGCCCG CGAGGCCTTC TTCGCCGAGG CCAACGTCAT GGCCCAGCTG TCGCACCACC CGTCGATCGT CACGGTCTAC CACGCCGACA TCGCCTCGGA CGGGCGTCCG TACCTCGTCA TGGAGTACTG CTCCCGCCCC GGGCTCGGCA CGCGCTACCG CATGGAGCGG TTCACGGTCG CCGAGGTGCT GCGCACCGGC ATCCGCGTGG CATCGGCCGT CGAGGCGGCG CACCACCTGG GGATCCTGCA CCGCGACATC AAGCCCGCGA ACATCCTCGC GACCGACTTC GGCTGGCCCG CGCTCACCGA CTTCGGCATC GCCTCGACCC TCGGGTCGTC GGCCGCCGCC ACCGGCATGT CGATCCCGTG GGCCGCCCCC GAGCTGCTCG CCGAGCGGCC GACGGGCGAC GCCCGCGGCG ACGTCTACTC CCTCGGCGCG ACCATCTACT CCCTGCTCGT CGGGCGCTCG CCCTTCGAGG TGACCGGTCG CAGCAACAGC CCGGCCGACC TGCTCTCGCG CATCGAGCGT GCACCGCTGC CCACCATCGA CCGCGAGGAC GTGCCGCCGG GCCTGTCGGC CGTGCTGGCG CGCGCCATGG CCAAGGACCC GGACCGGCGG TTCCTCAGCG CGCTCGCCCT CGCGCACGCG CTCCAGCAGG TCGAGCGCTC GATGCACCTG CCCGTCACCA GCATCGACCT GTCGCAGGAC ATCCTCCCCG AGGCCCCCTC CTCCCGCGGC GACGCCGACG GCTCGTCGGG CGACGGCTCG CGCGACGACC AGGTGACCCG CCTGCGCCCC GTGGTGAGCA TCGACCCGCA CGGCGGCCCC TCCGACCTCT CGCAGGGCTT CGCCGCACCC GCGGCTTCAC CGGCCACCCG TGCGCAGGCC CGGGCCGCCC GCCGCCCGCA GGCGCCGCCG CCCCCGCTCC CCGGGACCGG GCAGGGAGCG TCGAGCTCCC GCGACGTCGA CGAGGACGCG ACCCGGCTGC GACCCATCAC GACCATCACC GCCCAGACGT CCGTCCCCGA CCAGCGCCAG CGCTCGTGGG GGACGACGGG CGGCGACGTC CCGACCGGCA CCACCGGTGG CGTCCCGACG GGAACCACCG GTCGCGGACC GGCACGGGCT GCCGCGGTGC CCCCGCCGCC CGCGCCGGAG GGGACGAACC CCGCACAGGG CTATGCCGGT GCGCAGTCCT ACCCTGAGCC GCAGCCCTAC CCCGTGCCGC AGGCCTACCC TGCGCCGCAG CCCTACCCGC AGACGCTCGC CTGGCAGCAG CAGGGCCATC CGGCACAGGC CGGCCCTGTC GAGCAGACGG GCTACGTGCC GCAGCCCGGG CCGTCGGGGT ACCCGTCGCC CGGGCACCCG GCGCAGCACG GCGCAGGCCA CAGCCCGGAG GCGCCGTTCG CGCCGTCGGC GACGGCCTTC TCGCCCACGC CCGCCGAGAT CCGTTCCCAG CACTACCGCA AGCCCTCGTC CGACGACGAG ACCGGCCACC GCGGACCGCG GCGCGGGTGG GTCGTGGGTG CCGCGGCCGC CGTCGTCGTC GCCGCGCTGG TCACCGTCGG CGTGCTCACC CTCGGTCGCG ACGCCGACCC GGACCCGCAG GCCACCGACG CCCCGCTGCC CACCCCGACC GCGGTCGAGG AGGCCACCGT CCCGGCGCCG GCCAAGCTCA CCGGCATCGA CCAGGGCGAC GGCACCGCGG AGTTCACCTG GGAGAACCCG GACGAGCAGG AGGGCGACAC CTACGTCTGG CGCGAGGTCA CCGTCGGCTC TCAGGGGGAG GCTCGCCGCA CCACCTCGAG CGAGGTCGTC GTCCCCCTCG ACGACAGCAC CGGGGTCGTC TGCATCGAGG TGTCGATCGT CCGTGACGAC GGTCGCGCCT CGACCATGCC CGTCCAGGAG TGCAGCCGAT GA
|
Protein sequence | MSARRQPSIP PKIPGYEFVR LLGMGGFADV FEYRQELPRR SVAVKVLLSG SLDQEAREAF FAEANVMAQL SHHPSIVTVY HADIASDGRP YLVMEYCSRP GLGTRYRMER FTVAEVLRTG IRVASAVEAA HHLGILHRDI KPANILATDF GWPALTDFGI ASTLGSSAAA TGMSIPWAAP ELLAERPTGD ARGDVYSLGA TIYSLLVGRS PFEVTGRSNS PADLLSRIER APLPTIDRED VPPGLSAVLA RAMAKDPDRR FLSALALAHA LQQVERSMHL PVTSIDLSQD ILPEAPSSRG DADGSSGDGS RDDQVTRLRP VVSIDPHGGP SDLSQGFAAP AASPATRAQA RAARRPQAPP PPLPGTGQGA SSSRDVDEDA TRLRPITTIT AQTSVPDQRQ RSWGTTGGDV PTGTTGGVPT GTTGRGPARA AAVPPPPAPE GTNPAQGYAG AQSYPEPQPY PVPQAYPAPQ PYPQTLAWQQ QGHPAQAGPV EQTGYVPQPG PSGYPSPGHP AQHGAGHSPE APFAPSATAF SPTPAEIRSQ HYRKPSSDDE TGHRGPRRGW VVGAAAAVVV AALVTVGVLT LGRDADPDPQ ATDAPLPTPT AVEEATVPAP AKLTGIDQGD GTAEFTWENP DEQEGDTYVW REVTVGSQGE ARRTTSSEVV VPLDDSTGVV CIEVSIVRDD GRASTMPVQE CSR
|
| |