Gene Sked_05000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_05000 
Symbol 
ID8632137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp553613 
End bp553948 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content73% 
IMG OID 
ProductProtein of unknown function (DUF2516) 
Protein accessionYP_003313295 
Protein GI269793840 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGCCT CGCTCCAGCT CACCGTCATG CTCTTGCTCA CGCTCGCGCT GTTCCTCCTC 
GAGGTCTTCG CCCTCGTCGA CGCTGCACGC CGGCCGGCCG GGGCGTTCAC GAGCGCGGGC
AAGCGCACCA AGGTGTTCTG GGCGAGCATC CTCGCCGGAG GGGCGCTGCT CGGCTTCGTC
GGCCTCTACC CGCCGCTCGG CATCGGCCTG CTCGGCATGG CCGCGCTGTT CATGGTGGTC
CCTGCCGCGA TCTACCTCAC CGACGTGCGC CCCGCCCTCG GCCCGCACCG CCGCAGCGGC
GGACCGCGGT CTGGCCCCGG CCGCGGAGGC TGGTGA
 
Protein sequence
MFASLQLTVM LLLTLALFLL EVFALVDAAR RPAGAFTSAG KRTKVFWASI LAGGALLGFV 
GLYPPLGIGL LGMAALFMVV PAAIYLTDVR PALGPHRRSG GPRSGPGRGG W