| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_04800 |
|---|
| Symbol | |
|---|
| ID | 8632117 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 535771 |
|---|
| End bp | 537309 |
|---|
| Gene Length | 1539 bp |
|---|
| Protein Length | 512 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | di-/tricarboxylate transporter |
|---|
| Protein accession | YP_003313276 |
|---|
| Protein GI | 269793821 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.166557 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.382609 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGTCG TCGTGCTCGT GCTCGCCGTC GTCGTGTTCG TCTGGAACAA GGTGCCGGTC
GGGCTCGTCG CGATCGGCGT CACCCTCGCG CTGTACGGCA CCGGAGTGGT CTCGCTCGAG
CAGGCCTTCG GCGGCTTCGG CGACCCGGTC ATCATCTTCA TCGCCGCGCT GTTCGTGGTG
AGCGACGGCC TCGAGGCCTC TGGGGTCACC TCGTGGGCCG GGCAGCAGCT CGTCGACCGC
GCGCACGGCA GCCGTACCCG CCTCGTCGTG CTGCTCATGG CCCTCGTCGC GGTCGTCACC
GCGCTCATCA GCGTCAACGG CGCGGTCGCC GCGCTGCTGC CCATGGTGGT GGTGACCGCG
GTCCGCCTGC GGCTGTCGCC GTCGCAGTTC TTGATCCCGC TGGCCTTCGG GGCGCACGCG
GGCTCGTTGC TCGTCCTCAC CGGCACCCCG GTCAACGTCC TCGTCTCCGA GCTCGCCGTC
GGCGCGGGGG AGGAGCCCTT CGGGTTCTTC TCCTTCACCC TCGTCGGCCT GCCGCTCGTG
CTCGGCACGA TGCTCGTGGT GGTCCTCCTC GGCCCACGGC TGCTGCCGAA CCGCGCGCCG
ACGGCCCTGC CTCGCGACCT CAGCGGGCAC GCACGGCTCC TCGCCGAGCA GTACGCCCTC
GACGACCGCG CGCTCCTCGG CAGCGACACC GGTGTCACCG AGGTGGTCGT GTCCCCGCGG
TCCGCGCTCA TCGGGGCCGA GGCGTTCCCC GGCATGGTCA CCGAGAGCGG CGACCTGGTG
ATCGCAGCCA TCCAGCGCGG CGGGGAGCAG GTCGGGCCGA CGACGCTCCA GGCCGGCGAC
GCGCTCCTCC TCCAGGGGAC GTGGGAGGCG CTCGACCGGA CGACGACGGA CCCCGACGTC
ACCGTCGTCG ACCCGCCCCA GCTGCTGCGC CGCCAGGCTG CCCCGATGGG CGGCCGCGCC
AAGGTGGCGA TCGGCATCGT GCTCGGCATG GTGCTGCTGC TCGCGACGGG CGCCGTCCCG
GCCTCGGTCG CGGCCCTGCT CGCCGCGTGC GCCATGGTGC TGCTGCGCGT CATGACGGTC
TCCGAGGCGC ACCGCGCGAT CTCGTGGACC ACGCTCATCC TCGTGGGCGG CATGATCCCG
CTCTCCGTCG CGATCCAGAG CACCGGTCTG GCCGACGCGA TGGCCCGTGG CCTCGTCGAC
GTGGTCGGCA CGGACCAGCC GCACCTGCTG CTGCTGGGGA TCGTGGTGGT CACCGTGATC
CTCGGGCAGC TCATCAGCAA CATGGCGACG GCCCTGGTCA TCGGGCCGAT CGCCGTGGCG
GTCGCGGTCG ACACCGGCCT GTCGCCCCTG CCGATGCTCA TGGGCGTCAC CGTCGCCGCT
GCGGCCGCGT TCCTCACCCC GGTCGCGACG CCGGCCAACA CGATGGTCCT GGGGCCGGGC
GGGTACAGGT TCGGGGACTA CTGGCGCCTC GGCCTGCCGC TCACCCTCTT GTTCGTGCTG
GTGGCGACCT TCCTCGTGCC GGTCTTCTGG CCGTTCTAG
|
|---|
| Protein sequence | MTVVVLVLAV VVFVWNKVPV GLVAIGVTLA LYGTGVVSLE QAFGGFGDPV IIFIAALFVV
SDGLEASGVT SWAGQQLVDR AHGSRTRLVV LLMALVAVVT ALISVNGAVA ALLPMVVVTA
VRLRLSPSQF LIPLAFGAHA GSLLVLTGTP VNVLVSELAV GAGEEPFGFF SFTLVGLPLV
LGTMLVVVLL GPRLLPNRAP TALPRDLSGH ARLLAEQYAL DDRALLGSDT GVTEVVVSPR
SALIGAEAFP GMVTESGDLV IAAIQRGGEQ VGPTTLQAGD ALLLQGTWEA LDRTTTDPDV
TVVDPPQLLR RQAAPMGGRA KVAIGIVLGM VLLLATGAVP ASVAALLAAC AMVLLRVMTV
SEAHRAISWT TLILVGGMIP LSVAIQSTGL ADAMARGLVD VVGTDQPHLL LLGIVVVTVI
LGQLISNMAT ALVIGPIAVA VAVDTGLSPL PMLMGVTVAA AAAFLTPVAT PANTMVLGPG
GYRFGDYWRL GLPLTLLFVL VATFLVPVFW PF
|
|---|
| |