| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_04010 |
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| Symbol | |
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| ID | 8632039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | - |
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| Start bp | 447856 |
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| End bp | 450480 |
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| Gene Length | 2625 bp |
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| Protein Length | 874 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | hypothetical protein |
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| Protein accession | YP_003313202 |
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| Protein GI | 269793747 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00169592 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCGC AGGCCATCAA CGCCACCGGG CTGCCCGGGG CGAACCTCGA CCCCGACGCC
GTCGAGGCCG CCGCCGCCGA CCTGCTCACG CAGGCGACGT CGATCCGCGA CCAGGGAGCC
GACGTCAAGT CCACCTGGCA GGGCCTCGGC GCCTACTACA AGGCACCCGA GTCCGAGACG
CTCGTCGCCG TGATGGACCC GGTCGCCACC ACGACCGACA CCTTCGCGAG CGACCTCGAG
CGCGTCTCGG CGGCGCTCAG CACCTACGCG ACCGACATCC GCGACATCAA GGCCTCCCTC
GACACCCTCC GCTCCGACAT CGGGACCTTC CGCACCTCGA TCTCCGGCGA CGACGAGTGG
CAGTTCGAGC AGGACAACAT CGACACCAAC GACGCGCTCC GCACGCGCGC CGGGAACCTG
CAGGTCCAGC TCTGGGAGGC CGAGCGCACC TGCGCCAACG CCATCCGCGC GATCGACTGC
ATCGCGCCGT GGACGGCGAG CACCGGCGAC GACGACCCCA ACGGCTACGG GTACTCCGAG
ATCCCCGAGG ACGCAGAGAT GCCCTGGGGC TCCCAGGTGC AGCGCGAGGA CCACTGCCCC
AAGTCGGCCG CCGTGGGCGT CAAGAGCTTC GTCTGGGACG GCATCGTCAT GGACATCGGC
TGGGAAGGCC TCAAGGGCCT CGGCGGCATG ATCGGCCTCG GCGAGGACGG CTTCTCGTGG
GAGACCTTCG AGGCGACCTG GGGCGGGATG GGCGCGCTCA TCGGGCGCGA CCCCGAGACC
GGTGAGTGGG GCTGGGGAAC CGCCGGCAAC GCCTGGACCG AGACCGGAAA GTCGCTCATC
GCGTGGGACA TGTGGGCAGA GGACCCGGCG CGCGCCGCAG GCACCGCGCT CGGCAACATC
GCGCTGACCG TCTTCACCTT CGGCGCCGGT GGTGTCGTCA AGGGCACCGC GACCGCCGGC
CGGACGGGAC AGGTCCTCTC CGGGATCGGC AAGGGCGCCT CCGTGGTCAA CCGCGTCCTC
GACCCGACCG ACCTCATCAT CGGCGGCGCC AAGGCCCTCA AGGGCTTCAA GCTCGACGAC
GTGCTCTCCG GCCTGCGGAC CAACCTCAGC GACCTCAGCA CCGGCCTGTC GACGTCGCTG
CGCGGCATCG ACATCGACGT GGACATCGAG CTGCCCAACA CCCACCGCGG TGACGGCACC
GGTGGCACCG GCGGGAACTC GGGCGTCTTC GACGACAACC CCGCCGTCAA CCGCGGCGGC
GACGACGCCG GGGCGACGAA CAACGTCAAC CGCGACGTCG ACGTCTCCAA CGAGCACCCG
CGCGCCGAGC AGACCAACAA CACGAACCAG GCCGAGACGC CCGCGCAGCA GCCCGTCGTC
GACCTCGTGC GCGAGCACGA GCTCGTCGGG GCCGGTGCGC CCGGCTCACC GTCGACGCAC
CACGGGGGCG GGGTCCACCT GATCGACAAC GGTGGCAGCA GCCACAGCGG GTCCGGTGGT
GGCGGTGGTG ACGGGACCGG TGGTGGTCAC GGGTCTGGAG GGCACGGCGG GTCCGGAGAC
GGCACGCCTG GTGGGCCGGG CGACGGGACG CCCGGAGGAC CTGGCAACGG CTCTGGCGGC
GGCGGAGACA ACGGTGGCGG CGGGAACGGC GGCGACGGCA CCGGTGGTGA CGGACCGTAC
CGCGGCGACC GCAGCCCCGA CACCCCGCTC GGCAACAAGG CGGGGACGCA GGAGCACTTC
AACTACACGC TCGCCCAGGG CCTCGTACGG AACAACCTCA CCGAGGCGAA GTTCGTCGAG
CTCCTCGACA CGCCGCTGAA CAAGCTCAGC GCAGACGACC TCTGGGCCTT GCGCGACATC
CGCGACTCGC TCCCGGGCGT CACCCCGGAC ACCGTCCTGC AGAAGGTCAT CCCGCCGGAC
CTCGCACACA CCTTCATCAA CGACCTCGGC AAGCAGATCG ACATCGACTC CCCCGACGCT
GCGGCTCAGC TCGCCGCGTA CGACCGTCTG GTCCGGGAAA ACCCGGAGAT CATGGGCACC
ACCCCCACGA GGTATGGGGC ATCAGAGGTG GGAGGCTTCG TCTCTCGATC CGTCGATGTC
GGCGACCTGG ACACGAGAGG CACCTACGAC GGGATCGGCC TCGGCTACGA GAACACGAAG
TTCGGAGACG CTCAACGGCA GTACGTGGAC CAGAACTACT TCTCCATCGA GTTCGAGGCG
GGCAAGACCC AGCCATCCAC CGTCCACTAC GTGACAGACG CGATCGAGGC GCATCACACC
GAGCTCTCAC AGCTCAGCCC TGATGCTTTC AAGACACGGC TTCACGAGCT CGTCGAGGAG
CAGCACATCG CTCGAGAGCC GAGACCTACG TCGCCGAAGG CTCTCAAGGC CTGGGAAGAA
GCCCTGCTGG AGAAGCACAA CCACGTCGAC TACAGCCTCG ATCCCACCAA CCTCCATCGA
GGGAACGGCT TCGGAGGAAC GCGGGGGGCG TACACCCCTG AGCTCCAGAT CTTCGGTCGC
GTCGAGGTGC CCGCCGGAGC GGAGATGTGG AAGATCGCCC CAGATGGAGA ACGCGTCCTC
GTCGCACGCA TGGACAACTT CCAGCAGTGG AAGATGGTCT TGTGA
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| Protein sequence | MSAQAINATG LPGANLDPDA VEAAAADLLT QATSIRDQGA DVKSTWQGLG AYYKAPESET
LVAVMDPVAT TTDTFASDLE RVSAALSTYA TDIRDIKASL DTLRSDIGTF RTSISGDDEW
QFEQDNIDTN DALRTRAGNL QVQLWEAERT CANAIRAIDC IAPWTASTGD DDPNGYGYSE
IPEDAEMPWG SQVQREDHCP KSAAVGVKSF VWDGIVMDIG WEGLKGLGGM IGLGEDGFSW
ETFEATWGGM GALIGRDPET GEWGWGTAGN AWTETGKSLI AWDMWAEDPA RAAGTALGNI
ALTVFTFGAG GVVKGTATAG RTGQVLSGIG KGASVVNRVL DPTDLIIGGA KALKGFKLDD
VLSGLRTNLS DLSTGLSTSL RGIDIDVDIE LPNTHRGDGT GGTGGNSGVF DDNPAVNRGG
DDAGATNNVN RDVDVSNEHP RAEQTNNTNQ AETPAQQPVV DLVREHELVG AGAPGSPSTH
HGGGVHLIDN GGSSHSGSGG GGGDGTGGGH GSGGHGGSGD GTPGGPGDGT PGGPGNGSGG
GGDNGGGGNG GDGTGGDGPY RGDRSPDTPL GNKAGTQEHF NYTLAQGLVR NNLTEAKFVE
LLDTPLNKLS ADDLWALRDI RDSLPGVTPD TVLQKVIPPD LAHTFINDLG KQIDIDSPDA
AAQLAAYDRL VRENPEIMGT TPTRYGASEV GGFVSRSVDV GDLDTRGTYD GIGLGYENTK
FGDAQRQYVD QNYFSIEFEA GKTQPSTVHY VTDAIEAHHT ELSQLSPDAF KTRLHELVEE
QHIAREPRPT SPKALKAWEE ALLEKHNHVD YSLDPTNLHR GNGFGGTRGA YTPELQIFGR
VEVPAGAEMW KIAPDGERVL VARMDNFQQW KMVL
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