Gene Sked_02980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_02980 
Symbol 
ID8631936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp325662 
End bp326654 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content60% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003313101 
Protein GI269793646 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACT CCCACGCTCC GGTCTGGACC GGGCTGCCCT CTGCTCCGTC GGTCGTCTTT 
CATTACACGT CGGCACACGG ATTTCTCGGG ATGGTGCAGT CCGGTCAGTT GTGGGCAACT
GAGGCGAGCG GGCTGAACGA CTACTCAGAG ATCAAGGAAG GAGAGTCCTA CATAGGTGAC
CGATGGCGCG AGGAGAGGGA GAGGTTCACT GGAATTCTGG GGAGGGAGAA GGCGGACATC
GTCGACGAGT TTCTGTCGGG TTCCATCGTG CTGGCTGATG GGCTCGATGG TGTGTTCGTT
GCCTGCGCCT CAGCGTGCAA GGACGACGCA AATCAGTGGA GGCTCTACGC CGACAACGGT
CGTGGGTTTA GCGTGGAACT CGATACCAGT GTCCGGCTCG AGATCTCCGT GCCCGGTCAG
TCCGGCGCTG ATCACGACCC CGAGTGGGAT CTGCCATCTG GCGAGGCGGT GACAGAGTGG
GCGCCCGTGA TGTACGACAA GGACTCGAGG AACTGCGCGT TTGAAGATTT GGTCACTTGG
GCGTCAGGGA TTGAAGACTC TACCGGTGGG CGTCACTCCG AAGAAGACAT CTCTAGCATG
GATCGCGACA GCAGGTACAT CGACAATGCT TCCCGTCTCG GATTGTCGAT CAGCAGGTTG
GCGCAGTTCG TCAAAGGTCC AGGGTTCTCT GGAGAGAACG AGTCTCGCCT CGTCGTGACG
CCGGGGTACT GGACGAACCC GAAGATCATC AGCTTTCGCG CCTCGACAGT CGGCATCGTC
AGATACCTGT GCATCCAGGC AGCCGAGACT CTGGATCGAC ATGACGAGAA GTCTCGAGGG
GCGCGCGTCC GGACCCTGCC GATCCGGAGC ATCACCGTCG GCCCCGCCCA GAACTTTGAG
CTCGTCAGAC CGTCGCTCGA GGCTCTCTTG GACAGGTACG GGTACCGAGG CGTGGAGATC
AAGAGATCAA CGACTTCGCT GAGGTGGACC TGA
 
Protein sequence
MENSHAPVWT GLPSAPSVVF HYTSAHGFLG MVQSGQLWAT EASGLNDYSE IKEGESYIGD 
RWREERERFT GILGREKADI VDEFLSGSIV LADGLDGVFV ACASACKDDA NQWRLYADNG
RGFSVELDTS VRLEISVPGQ SGADHDPEWD LPSGEAVTEW APVMYDKDSR NCAFEDLVTW
ASGIEDSTGG RHSEEDISSM DRDSRYIDNA SRLGLSISRL AQFVKGPGFS GENESRLVVT
PGYWTNPKII SFRASTVGIV RYLCIQAAET LDRHDEKSRG ARVRTLPIRS ITVGPAQNFE
LVRPSLEALL DRYGYRGVEI KRSTTSLRWT