Gene Sked_01780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_01780 
Symbol 
ID8631816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp185736 
End bp186233 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content73% 
IMG OID 
ProductProtein of unknown function (DUF2587) 
Protein accessionYP_003312984 
Protein GI269793529 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.811908 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACCGA CAGAGCACGC ACCCGACGAC GAGCGCTCCC GGACCACGGT CATCCACGAG 
CCGGCCAAGA TCCTGCGGAT CGGCGAGATG GTCAAGCGTC TGCTCGAGGA GGTGCGCAGC
GCGCCGCTCG ACGAGGCGGC CCGGGCCCGG CTCGCCGAGG TGCACGAGCG GTCCCTCGCC
GAGCTCGAGG ACGGGCTCTC CCCCGACCTC GTCGCCGAGC TGCACCGCGT GACCCTGCCG
TTCACGGACG ACGTCGTGCC GTCGGAGTCG GAGCTGCGCA TCGCGCAGGC CCAGCTCGTC
GGCTGGCTCG AGGGCCTCTT CCACGGGCTG CAGACCGCGA TGGTGGCGCA GCAGATGGCT
GCCCAGGCAC AGCTGCAGGG CGGGCAGCGT GCGCTGCCGG CCGGGCTGTC GGCCGACGGG
TCCCGGACAG CCGACGGGTC TAGGACAGCA GAGAGCCCGG GGGCGGACGG ACGTCCGACC
CCGGGCCAGT ACCTCTGA
 
Protein sequence
MAPTEHAPDD ERSRTTVIHE PAKILRIGEM VKRLLEEVRS APLDEAARAR LAEVHERSLA 
ELEDGLSPDL VAELHRVTLP FTDDVVPSES ELRIAQAQLV GWLEGLFHGL QTAMVAQQMA
AQAQLQGGQR ALPAGLSADG SRTADGSRTA ESPGADGRPT PGQYL