Gene Sked_01670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_01670 
Symbol 
ID8631805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp173502 
End bp174491 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content75% 
IMG OID 
ProductABC-type multidrug transport system, ATPase component 
Protein accessionYP_003312973 
Protein GI269793518 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.684849 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.194324 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCAGCC GGACCGCCGG GCCCGGCCTC GCGCGCGCCG CCAGCACCTC GACCGACGCC 
GCGATCCGCA CGCACGGCCT CACCAAGCGC TTCCGCTCGG GCCAGGTGGC CGTGGACGGG
ATCGACATCG AGGTCCCGCG CGGGGCGGTC TACGGGTTCC TCGGGCCCAA CGGCTCCGGG
AAGACCACGA CCATCCGCAT GCTCCTCGGG CTGGTCGGCC CGACCGACGG CTACGCCGAG
CTCCTCGGCG AGCGCATGCC GGACGCGAGC GCCTCGGTGC TGCCCCGCGT CGGGGCCCTG
GTCGAGGGCC CTGCCTTCCA CCCGTACCTC AGCGGCCGCG CCAACCTCGA GCGCCTCGAC
GCGGCCGACG GCACCACCCG CCGGTCGACG CGCGCTGCAC GGATCGACGC GTCTCTCGCG
CGTCTGGGTC TGGGCGCCGC GGCCTCCAAG CCCTACCGCC AGTACTCGTT GGGCATGAAG
CAGCGGCTCG GCCTCGCGGC CGCCCTGCTG CGCCCCCGCG ACCTGCTGAT CCTCGACGAG
CCGACCAACG GCCTCGACCC GCAGGGCACC CGCGAGGTCC GGCACCTCGT CCGCGAGCTC
GCCGACGCCG GCACCACGGT CCTGGTCTCG TCGCACCTGC TCACCGAGAT CGAGCAGGTG
TGCACGCACA TCGGCATCAT GAGCAAGGGC CACCTGGTGC TCCAGGGGCC GCGCGAGACC
GTGACCGAGG CGCACGAGAC CGTCGTCGTG GTCACCACCT CGCCGGACCA CCGCGGCTCG
GCGGTCGAGG TGCTCACCGG TCTGGGGCTC ACCGCCCCCG AGGTCGCCGG CACCACCGTC
ACCGCGGCGC TCGGCGACGT CCCGCCCGAG CGGGTCTCGG TCGCGCTCGT GCACGCCGGC
GTCGACCTCC TGGGCCTCGA GGTCCACCGC CCCAGCCTCG AGAGCGTCTT CGTGCGCCTC
ACCGGAGAGG GATTCGATGT CGCCCGCTGA
 
Protein sequence
MPSRTAGPGL ARAASTSTDA AIRTHGLTKR FRSGQVAVDG IDIEVPRGAV YGFLGPNGSG 
KTTTIRMLLG LVGPTDGYAE LLGERMPDAS ASVLPRVGAL VEGPAFHPYL SGRANLERLD
AADGTTRRST RAARIDASLA RLGLGAAASK PYRQYSLGMK QRLGLAAALL RPRDLLILDE
PTNGLDPQGT REVRHLVREL ADAGTTVLVS SHLLTEIEQV CTHIGIMSKG HLVLQGPRET
VTEAHETVVV VTTSPDHRGS AVEVLTGLGL TAPEVAGTTV TAALGDVPPE RVSVALVHAG
VDLLGLEVHR PSLESVFVRL TGEGFDVAR