Gene Sked_01470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_01470 
Symbol 
ID8631785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp152079 
End bp153524 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content67% 
IMG OID 
Productglycosyl transferase 
Protein accessionYP_003312953 
Protein GI269793498 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.312762 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCACAGT TCGAGGACGA CATCATCATC GATCACGACA CCTTCGGTGA GATCGAGAAG 
TACGCGAACG AGTTCATCGA GAGCGTCGAG GCGCTCACGA CGGCCCGCCC GACGATCGGC
TGCATCATCC CCGCGTACAA CGAGGAGGAG TCGATCGGCT CGGTCATCGA GTCGCTCCTC
GCCCAGACCC GCCTGCCCGA CGTCATCCAC GTGATCGTCA ACAACACGAC CGACAAGACC
GTCGAGATCG CCGCGGGGTA CGCCGGCGCG CACTCCTCCG AGGTCGACGG CGTCGAGCAG
TTCACCGAGG TGTACGTCCA CGACATCGGC AAGAACCCCG ACAAGAAGGT CGGTGCCCTC
AACTACGGCT TCACGCTCAT CGAGGGCATG GACTACCTGC TCGGCGTCGA CGGCGACACG
GTCGCGAGCG AGAAGGCCGT CGAGCAGCTC GAGGAGGAGA TCGTCTCGGA CAGCCGCATC
GGCGGCATCT CCGCGATCTA CACGATCGAC CCCGACCCCA TCCAGGGCAC GGTCGCCAAG
TTCCTCATCT CCGGCCAGCG CGCGCAGTTC GCGGCCTTCA ACATGCAGAA CATGCTCCGC
GGCCGGAACA TGGCGGTGCT CGGCGGCCAG TACTCGATCT TCGCCACCAA GGCCCTGCGC
GACGCCATGA CGCAGAACCA CCAGACCACG CCGTGGGTCA AGGACTCCGA GGTCGAGGAC
TCGCTGCTCT CGCTGCAGAT CAAGAGCGCC GGCTACCTCA CCAAGATCAG CGCCCGTGCC
CGCGCCGACG TCGGCGGCAT GACCACCCTG CGCGGCCTCG ACGCCCAGCA GGTCAAGTGG
AACTACGGCG CCATCGAGCT CATGTGGCCC GGGCAGCGCG GCGACACCAA GGGCCAGCCC
TTCCACCCGA ACCTGCGCCT GCGCTGGCTC GAGAACCTGT CGATGGCCGT CAACGCCTTC
GCGCGAGTGA TGTTCATCCT GCTGGTCGTC GCGGCCGTGT CGATCGACGC CTTCGTCTTC
TCGCCCGTGT GGCTGGTCCC GCCCGTCGTC GCCGCAGCGC TCAACGTCCG CATCGCGATG
TCGATGGAGG GCCGCACCAG GCGGGACATC CTCTTCGCCG CCCTGATCTT CCCCGCCGAG
ATGTACATGT GGGTGCGTAT CGGCCACTTC CTGCGGGCCT GGACCAAGTT CGCGAGCAAG
AAGCAGGTCG ACAACTGGGC CGCGCAGGCC AAGGCAGAGC GTGGCGCGGG CAACGCGTAC
CTCACGCCGC TGCTCATCAC CGTGGCCGTG ATGATCGCCC TCGCGGCCGT GTGGGTCCAG
CTGTCCGTGC TCATCCAGTC GACGGTCCTC TGGGTCGCCT GGCCCGTCCT CGGCACCATC
GCCGTCGCCC AGACCCTCGG CATGTTCGGC AAGCTCGTGC GTCGCCACCA CGGCTACAAG
GCGTGA
 
Protein sequence
MAQFEDDIII DHDTFGEIEK YANEFIESVE ALTTARPTIG CIIPAYNEEE SIGSVIESLL 
AQTRLPDVIH VIVNNTTDKT VEIAAGYAGA HSSEVDGVEQ FTEVYVHDIG KNPDKKVGAL
NYGFTLIEGM DYLLGVDGDT VASEKAVEQL EEEIVSDSRI GGISAIYTID PDPIQGTVAK
FLISGQRAQF AAFNMQNMLR GRNMAVLGGQ YSIFATKALR DAMTQNHQTT PWVKDSEVED
SLLSLQIKSA GYLTKISARA RADVGGMTTL RGLDAQQVKW NYGAIELMWP GQRGDTKGQP
FHPNLRLRWL ENLSMAVNAF ARVMFILLVV AAVSIDAFVF SPVWLVPPVV AAALNVRIAM
SMEGRTRRDI LFAALIFPAE MYMWVRIGHF LRAWTKFASK KQVDNWAAQA KAERGAGNAY
LTPLLITVAV MIALAAVWVQ LSVLIQSTVL WVAWPVLGTI AVAQTLGMFG KLVRRHHGYK
A