Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3984 |
Symbol | |
ID | 4257842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 4728356 |
End bp | 4729426 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638124673 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_740018 |
Protein GI | 114049468 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.127116 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA TCGCCATTTT TTGCCATAAC TTTTTCTCGA ACGGCACAGT CAAAATCGCC TTATCCCAGG CCGAAGTGCT GCAGGAAGCC GGGCAAGATG TTCACCTCTT TGTGTTCCAT AAAGAGGGGG ATTTTATGCC ACCAGAAAAT GTGACGATTC ATTACCTGTA TGAAGCTGGC CAAAAGCCAA CTCTACAGGA GCAAAGACAA CACCTAAAGG CCAAGGTGGC CGAAGCGGAA CAATCGGGTA AGTTCTCGCT ATTCTTAAGT AACTCAACCG ACTGCGATGT AGTTGTGTCG GGTTGCGACT TCGATCCCTG CTATTACTTT TGCCACTGCG CCCTTAAGCA AGAACTCTTG ATGGAATTAA AGCGTGGTCC AGTGCATTTC TGGCGTCGCT GGAAAAAGGC TAAGGCACTG ATTGGCAAAA AGATCATTAC TGTTTCCAAT GGCATCGCCG ATGAGCTTAG AGCCACTTCT TGGCTGAAGC CACAAAGCGT TCAGACCATC TATAATCCCT TTAGATTGGA AGAAATCCGT AAGAAGACTC AGGAAGAAAT TGCCGAGATC CCAAGCGAAC CTTATATGAT CCATGTCGGC CGTGTGACAC GGCAAAAGCG CCACGACATT TTATTTAAGG CGCTCAGGGA TATGCCAACG GCCCCTAAGC TTGTCCTGCT GTGCAATCGC CCAAAGAAGG CACGCAAACT CGCCAAGAAA TACGGTGTCG AACACAGAAT CATCACACCT GGGTTTCAAC ACAATCCCTA CGCCTGGATT GCCAAAGCAG AGTTAATGTT ACTCAGCTCA GATTTTGAAG GCCTACCGAC CGTTGTGATT GAGTCTTTAG CCTGTGGCAC ACCTGTCGTC AGTACTGATT GTCCACACGG GCCAAATGAA ATTCTCACAG GGCATTTGGC CCAATATCTC GTCCCCGTTC GCCAACCTGC GCTGTTGGCA CAAAAAGCGC TGGAGTGTTT GGCCTCACCA CCAGCTTTAG ACAATCTAGA AATATTAAAG GCCGTAGACA GCCAATATAT TGCCGCTCAA TATATCCACT TAGCACAATA A
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Protein sequence | MKKIAIFCHN FFSNGTVKIA LSQAEVLQEA GQDVHLFVFH KEGDFMPPEN VTIHYLYEAG QKPTLQEQRQ HLKAKVAEAE QSGKFSLFLS NSTDCDVVVS GCDFDPCYYF CHCALKQELL MELKRGPVHF WRRWKKAKAL IGKKIITVSN GIADELRATS WLKPQSVQTI YNPFRLEEIR KKTQEEIAEI PSEPYMIHVG RVTRQKRHDI LFKALRDMPT APKLVLLCNR PKKARKLAKK YGVEHRIITP GFQHNPYAWI AKAELMLLSS DFEGLPTVVI ESLACGTPVV STDCPHGPNE ILTGHLAQYL VPVRQPALLA QKALECLASP PALDNLEILK AVDSQYIAAQ YIHLAQ
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