Gene Shewmr7_3953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3953 
Symbol 
ID4255958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4696064 
End bp4696699 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content51% 
IMG OID638124642 
Productparaquat-inducible protein A 
Protein accessionYP_739987 
Protein GI114049437 
COG category[S] Function unknown 
COG ID[COG2995] Uncharacterized paraquat-inducible protein A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGTG TACGCAACTC TCTCCTTCCT ATTCTCGTTA TTCTGCTGTC TTTGGCGCTG 
TTAATTCCCG GCGTGACTCA ACCCATTTTG AGCCTCAATG GCAGCATAGA TAAGGCCAAA
CTCACCGAAC AAGGGATTGA GCAGGTCGCA CAAAGTTTCG ATGAGGACTC GGGGCGCGAC
AGTGCCCGCG GTATGCTGAA TATGGTCAGT GGCCTGTTGG GGCTGAACAA CCTCAAGGGC
GAGGTAGAAG TATTACAGCA AACACGCAGT ATTTGGAGCA CAGTCACCGA ATTATACAAC
TCTGGCAATG GCTTAGTGGC CGGGCTAGTG ATGCTGTTTA GTATCATTAT CCCCGCAGTG
AAACTCAGTC TGATGTTGGT ACAACAAAGC GTGAGTTCGG TTGGGTTGCA GTGGCGCATT
CATCATATCG TCTCTGCGCT GGCGAAATGG TCGATGGCCG ATGTGTTTGT GGTGGCCCTA
ATCATTACCT TTTTGGCGGG CAATGCCTCG GGTGGCATGG GCGAAATGCT AAAGACCAAG
GCGCAGTTTG AGAGCGGATT CTACTTCTTT ACCGCCTACT GCATTCTCTC TATCGCCAGT
GGTTACTTAG TGCGTCGTCC AACACCGATT CTGTAG
 
Protein sequence
MNSVRNSLLP ILVILLSLAL LIPGVTQPIL SLNGSIDKAK LTEQGIEQVA QSFDEDSGRD 
SARGMLNMVS GLLGLNNLKG EVEVLQQTRS IWSTVTELYN SGNGLVAGLV MLFSIIIPAV
KLSLMLVQQS VSSVGLQWRI HHIVSALAKW SMADVFVVAL IITFLAGNAS GGMGEMLKTK
AQFESGFYFF TAYCILSIAS GYLVRRPTPI L