Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3953 |
Symbol | |
ID | 4255958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 4696064 |
End bp | 4696699 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638124642 |
Product | paraquat-inducible protein A |
Protein accession | YP_739987 |
Protein GI | 114049437 |
COG category | [S] Function unknown |
COG ID | [COG2995] Uncharacterized paraquat-inducible protein A |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGTG TACGCAACTC TCTCCTTCCT ATTCTCGTTA TTCTGCTGTC TTTGGCGCTG TTAATTCCCG GCGTGACTCA ACCCATTTTG AGCCTCAATG GCAGCATAGA TAAGGCCAAA CTCACCGAAC AAGGGATTGA GCAGGTCGCA CAAAGTTTCG ATGAGGACTC GGGGCGCGAC AGTGCCCGCG GTATGCTGAA TATGGTCAGT GGCCTGTTGG GGCTGAACAA CCTCAAGGGC GAGGTAGAAG TATTACAGCA AACACGCAGT ATTTGGAGCA CAGTCACCGA ATTATACAAC TCTGGCAATG GCTTAGTGGC CGGGCTAGTG ATGCTGTTTA GTATCATTAT CCCCGCAGTG AAACTCAGTC TGATGTTGGT ACAACAAAGC GTGAGTTCGG TTGGGTTGCA GTGGCGCATT CATCATATCG TCTCTGCGCT GGCGAAATGG TCGATGGCCG ATGTGTTTGT GGTGGCCCTA ATCATTACCT TTTTGGCGGG CAATGCCTCG GGTGGCATGG GCGAAATGCT AAAGACCAAG GCGCAGTTTG AGAGCGGATT CTACTTCTTT ACCGCCTACT GCATTCTCTC TATCGCCAGT GGTTACTTAG TGCGTCGTCC AACACCGATT CTGTAG
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Protein sequence | MNSVRNSLLP ILVILLSLAL LIPGVTQPIL SLNGSIDKAK LTEQGIEQVA QSFDEDSGRD SARGMLNMVS GLLGLNNLKG EVEVLQQTRS IWSTVTELYN SGNGLVAGLV MLFSIIIPAV KLSLMLVQQS VSSVGLQWRI HHIVSALAKW SMADVFVVAL IITFLAGNAS GGMGEMLKTK AQFESGFYFF TAYCILSIAS GYLVRRPTPI L
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