Gene Shewmr7_3316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3316 
Symbol 
ID4255185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3925263 
End bp3926888 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content52% 
IMG OID638123998 
Producthypothetical protein 
Protein accessionYP_739355 
Protein GI114048805 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAATC TAAGACCAGC TCTAGGCAAT AAGGAACATG GCGCGGTACT GCTTATCGTC 
TTAGTCTTCA GTCTGTTAGC GAGTTTGCTG GTGGTCACGT CCCTCAGGGA TAACCTAGTA
CAAGAGCGAC TGAGTGGTAA CTTTCAAAAA CAGGTCAATG CGCAGCTACT CGCCGAACAG
GGAATGCACG AGAGTTACAA CCAACTTAAG ACTCAGCTAC AGCGCGCGCC TAATCAAGGC
CTGCAAACCC TTTATGAGCA ACTCCCCGCC GAAGCCGATG GCAGCCTCGA AGGCAGCAGC
TATGCCCTCG AAAACGGCCA AATCGCCGGG GCCGATCTTA GCCTCGACAG TCGTGGCAAT
CATTTAGAAG GCGAGGCCAA ACTCAATGCC CAGTTCACAC TGCAGGGCAG TCACGGAAAC
ACGATTTTCA ATGATGCGAT TGTGTCCTGC GAGAGCTTAA ACCTTACCGG CAGCAGTAGC
ATCGATGGCT ACGATTCCCG TAAAGGTGCC TATGGCGAAA GCATCAGTAA CGGCCAAGGT
GGCAGTGAGC TTAATCAACA CGGCAAAGGC AATGTCACCA CCATAGAGCC CAATGCCAAT
ATTACGCTCA CGGGCAGCGC GCCGATTTAT GGCGATGTCA GTGCCACTGG CAGCGTTACC
CTCACGGGTT CGGCGGATAT TCATGGCAGC ATTCAGGCCA ATAATGATGT CACCCTAGGC
GCGGGGACCA TCAGTGGAAA TATCGCGGCG GGTAATAACT TTAACTTGGC CAATAGCGGC
ACGGTGGAAG GCTCAGTCAA AGCCAATAAC AATGCCGCCA CGGCGCCCAA AGCCCAAGTG
AATGGCACAC TGCAATATGG TGGCGACGGC AACTTTCATC AAGATAGTCA GATTGGCAAC
TTAGTCAACG CACGCCCCAA TGTGCCCCCC TTGCCCGCAA AATCCTGCGA TCCATTGGAT
ATAGGCGCAG TGATGGGCGG CTTTAAGATG CCCAATAACG GCGCACGGAC CATTGATTCC
AACGCTAATG TCACTATCAC GCCAACGGGG TCGAGTAAGA CCGAACTCGG CTGGAAAGGT
GATTATTTCC CGAGCCTTAC CCCAACCTCA GAAAACATTT TAGGCAGTGA AACGCCAGTA
TATAACCTCG ATAGCTTAGT CATGAGTGCC GATGGGGTAC TCAATATCAG TGGCGGCGAT
GTCACCCTGA TAGTCAATGG TGACTTTAAG ATGAGTGGCT CGAATCAGCT GAATATTGCC
CCAGGCTCAA GCCTTACCCT GTTTGTGGGC GGTGAGGTCG CCTTTACTGC GGGGACAAAT
AACGGCAATA ACATTAAAGG GCAAACCCTG ACCGACAGCA ACAAGCCGCC ACTGTCTATT
TTTTCTGGTT CGGATAAGGA TGTGACTGTT AGCGGTAACG TGCCAATTTA CGCCGCGCTC
TACGCGCCCA AATCTAAGGT CAATCTCCCC GGCGGCCCTG AGATTTTCGG CTCGGTGAGG
GGCAAATCCA TCACCGCGAC CGGAAATGGA AAAATCCACT ATGACAATGC CTTAGGCGCA
GCCGACTTAG GCGAAGGTAA CGCTAAACCC GCTGTCATCT TGCTCAAGCA ATGGCAATAT
TTATAG
 
Protein sequence
MDNLRPALGN KEHGAVLLIV LVFSLLASLL VVTSLRDNLV QERLSGNFQK QVNAQLLAEQ 
GMHESYNQLK TQLQRAPNQG LQTLYEQLPA EADGSLEGSS YALENGQIAG ADLSLDSRGN
HLEGEAKLNA QFTLQGSHGN TIFNDAIVSC ESLNLTGSSS IDGYDSRKGA YGESISNGQG
GSELNQHGKG NVTTIEPNAN ITLTGSAPIY GDVSATGSVT LTGSADIHGS IQANNDVTLG
AGTISGNIAA GNNFNLANSG TVEGSVKANN NAATAPKAQV NGTLQYGGDG NFHQDSQIGN
LVNARPNVPP LPAKSCDPLD IGAVMGGFKM PNNGARTIDS NANVTITPTG SSKTELGWKG
DYFPSLTPTS ENILGSETPV YNLDSLVMSA DGVLNISGGD VTLIVNGDFK MSGSNQLNIA
PGSSLTLFVG GEVAFTAGTN NGNNIKGQTL TDSNKPPLSI FSGSDKDVTV SGNVPIYAAL
YAPKSKVNLP GGPEIFGSVR GKSITATGNG KIHYDNALGA ADLGEGNAKP AVILLKQWQY
L