| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3302 |
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| Symbol | |
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| ID | 4255397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 3905977 |
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| End bp | 3906642 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638123984 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_739341 |
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| Protein GI | 114048791 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGTACTA TCAATGAATT AGTTTTTTTA CATCAATTAG CGGTCCCTTG CCATTTAGCG
ATACTCGCCG AATCCATGGG ATTAAAAACA CGGATTGTTA AACAAGTTAC AGAGTTAGAT
GTAGGTAATA GTCATCACTG TTTTTGTCTG ATATCCCAAA AAGGATCTGC TTTGGATAAT
GAAGGTATTC CCTTGTCGGC ATCATGTTTA GTTCCCCATA TTCCTATTGC TCTATACCAA
GTTGAACGTA ATTCTTTAGA TCAGGAAGTG GCTATGTTGC AGGGGATCCG GGGGCTGTTA
TTTACTGATC AACGAATGGA CTTAATGTTG ACAGGATTAC GTAAAATGGT CGCAGGTGAA
CTGTGGTATG ATAGAACGCT ATTAAGTAAG ATGTTTTGCC GAATGGTACA GAAGTTAGAA
GACAATAATG AGCTGTCCGC CGATAATGCG GCCGTATTAC AGATGCTGAC TAACCGTGAG
CGAACCATCA TTCAGTTTGT GTCTAACGGT GCGCGTAATA AGGAGATTGC CGATAGATTA
TTTATCAGTG AGCATACTGT AAAGGCGCAT ATATCCTCTA TCTTCCGTAA AACCCAGTCC
CGTAATCGTG TCGAATTACT TCGTTGGGTG CAAACTTATC AGCCACATTT CGAATTGTGT
AGCTAG
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| Protein sequence | MSTINELVFL HQLAVPCHLA ILAESMGLKT RIVKQVTELD VGNSHHCFCL ISQKGSALDN
EGIPLSASCL VPHIPIALYQ VERNSLDQEV AMLQGIRGLL FTDQRMDLML TGLRKMVAGE
LWYDRTLLSK MFCRMVQKLE DNNELSADNA AVLQMLTNRE RTIIQFVSNG ARNKEIADRL
FISEHTVKAH ISSIFRKTQS RNRVELLRWV QTYQPHFELC S
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