Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2392 |
Symbol | |
ID | 4256017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2832480 |
End bp | 2834162 |
Gene Length | 1683 bp |
Protein Length | 560 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638123061 |
Product | peptidoglycan binding domain-containing protein |
Protein accession | YP_738435 |
Protein GI | 114047885 |
COG category | [S] Function unknown |
COG ID | [COG2989] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.937016 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCACT TCAATCAATT CAAATCCGCC TTACTCCTTA TCCTTACGCT AGTCAGCACC AATGTTTTTG CCTCGAATCT CGAACTTGAG GCGCTGCTCG AGCCCCTTTC CACAGGGGAG CGAGTCAAAG TCGACAACAC CCAAATCATT AGTGCAAAGT TGCTGTCGCG GGTCTACCAA GTACGCCAAT ATCAACCACT CTGGCAAGAC AGAGACTACG CTGGCACTAT GCTCGATGTG ATTAAAAGTG CCGATGAGGA AGGTCTTGCG AAGGAAGATT ACCATTACTC CAAGTTGCTC GAGCTTCACC AACAACTCAG AGCCTCGAGT TGGCAGGATG AATACCGCAG CAATGTATTT GAAGTGCTGC TAAGCGATGG GATCATCACC TACGCCATTC ATTTACTGAA TGGCAAAGTG AACCCCAGTA TGCTCGGCAA AACTTGGAAC TATGATGAAA CCCATCTGGA TTTCGACACC ACATTAAAGC AGCTCGAAGA ACACATTAAA GCCCATACCG TGGCTGACGC TATTGCAGGC TTAGCGCCTA AGATTGCGCC CTATCAACAG CTTAAACAGT ATCTAGCCCA GTACAAAGAC TTGGCGGCAC GTTATCCTTT TAGCCCCATT CCCTATACGG AAGTAATCAA ACCGGGCAGT ACTTCCCCCT CGGTACAAGG CATTGCCACA CGGCTAACAG AGTTAGGTTA CTTAGCTGCA AGCGCGCCAG CGGACAATAG CGCCGCCGTG AGCCAGCCCT TAACGTACGA CAGCACACTT GAAGCCGCGG TGCGTCAATT CCAAACCGAC CATAGTCTTA AAGCCGATGG CGTGATTGGT GCGGGCACAA TGGCGGCGCT CAATGTGCCC TACTCGCAAC GGGTCGAACA GATCCGTATT AACCTCGAGC GTGCGCGCTG GTTATCGGCA AACTTACGCG CCAATTACCT TATCGTCAAT TTAGCAGGTT ACGAGCTGTT ACTCTTTAAA GACAACAGCT TAAGCTGGCG AACCGACATT ATCATCGGCA AAATTAACGC TAAAACACCG CTGTTTAAAT CCAAGTTAAA ATACGTGGTC GTTAATCCGA CTTGGACTGT GCCCCGCAGC ATTTCCACCG AGATCATCAA TCACTTACGT AAAGATCCCG ATTATTTACA GAAGAAACAC TTTAAAGTGG TCGAAGGCTC GGGCACGCCC GTGGATGCAA GCGGCATCGA TTGGCACAGT ATGACGCGCA AGAACTTCCC CTACTGGTTT GTGCAAGAAC CGGGTGAGGA TAACTCCCTT GGGGTAGTCA AGTTTATCTT CCCTAACCAA TACTCGATTT ATCTGCATGA TACGCCAGCT AAAAGTCTGT TTGAACAAAC GGATAGGGCC TTCAGTCATG GCTGTATTCG AGTCAAAGAT CCACTCGTGC TGGCGGATAA ATTGCTGAGT GCCAATGCCA ATTGGTCAAG TAACACGCTC AGTAGCAAAC TGAGTGAGGG AAAAACGGAG AACCTGTTCT TAGATGAACC CTTAGATATT TTGATCATGT ATTGGACCGT CACCTTAAAG GACGGGAAAA TCAAGTTTTA CAATGACGTA TATAAACGCG ATCCGGTACT TATTGAGGCA TTAAACCGCC CAACCTATGA GGGTGTGTTA GCCGATGATG GCTTACTCAA TACCATGGAA TAA
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Protein sequence | MMHFNQFKSA LLLILTLVST NVFASNLELE ALLEPLSTGE RVKVDNTQII SAKLLSRVYQ VRQYQPLWQD RDYAGTMLDV IKSADEEGLA KEDYHYSKLL ELHQQLRASS WQDEYRSNVF EVLLSDGIIT YAIHLLNGKV NPSMLGKTWN YDETHLDFDT TLKQLEEHIK AHTVADAIAG LAPKIAPYQQ LKQYLAQYKD LAARYPFSPI PYTEVIKPGS TSPSVQGIAT RLTELGYLAA SAPADNSAAV SQPLTYDSTL EAAVRQFQTD HSLKADGVIG AGTMAALNVP YSQRVEQIRI NLERARWLSA NLRANYLIVN LAGYELLLFK DNSLSWRTDI IIGKINAKTP LFKSKLKYVV VNPTWTVPRS ISTEIINHLR KDPDYLQKKH FKVVEGSGTP VDASGIDWHS MTRKNFPYWF VQEPGEDNSL GVVKFIFPNQ YSIYLHDTPA KSLFEQTDRA FSHGCIRVKD PLVLADKLLS ANANWSSNTL SSKLSEGKTE NLFLDEPLDI LIMYWTVTLK DGKIKFYNDV YKRDPVLIEA LNRPTYEGVL ADDGLLNTME
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