Gene Shewmr7_2377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2377 
Symbol 
ID4256757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2817649 
End bp2818953 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content52% 
IMG OID638123047 
Productaminoglycoside phosphotransferase 
Protein accessionYP_738421 
Protein GI114047871 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0510] Predicted choline kinase involved in LPS biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.1275 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.630893 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCCGA ACATTGGGCA GGACAAGGAT GCGCTGCTTG CGGTATTAGC GCAGGCAGGG 
CTTACTGATA TCAGCCAAAT CCAGCCGTTA GCGGATGGTT TAAGTAACCA CAACTATCAT
ATCGAGACAC CGACGGCGCA TTATGTCTTG CGTGAAAACG CCGATGCCGC CGACAGCTTT
TGTTCGCGGG AGCAAGAGTT GTTCTATTGG CGTCATCTTG CCAAGGCAAA GCTTGCTCCC
GAGTTGCTGT GGGTGAGTGG CGATCAGCGT TACTACCTAA GCCAGTATAT CTTCGCGCAG
TCTCTGCCAA GCCTTCCCGT AGCACATCCG TTTGCACCGC TGATGGAGGA TGTTGAGGGG
AGTGATAATC TGGTCATTGA AAAGGATATT ACGGCAAGTG GGACTTATAC ACTTGAGCGA
CCCGAGGTGC CACGCGAGCC AAGTATGGCA TCAGGTCATC AAGAACTGAG CTTGCAAAAC
TTAAGCCTGT CAAACTTAAG CTCGAAAGAA TTAAGCTGGA AAGAATTAAG CTGGAAAGAA
TTAAGCTGGA AAGAATTAAG CTGGAAAGAA CTAGAGTCTC AATGCTGTGC GACGACCTTT
TGCCAAGGTG AAGCGCACAT TGAGGCTTGG TTGCAATCTC ATGCCGATTT CAAGGGCGCA
GCAGACAAGC AGGCTTGGTA TCAGTCCGAA CGGCTCGCCC TATTGGAAGC CTTAACGCCG
AATCGCGCCC ACAGCCTGTT ACTGCAATTG CTGCAACAGC TACGCGAGCA AGCGACTGGG
CCGTACCACA TCAGTATCAC TGAGCAATGG CAGGAATATC ACACGCAGTT GTTAGACTTT
GCCGCAGCGG ATATGGGCGA GGCGTGGCAG AGCCGATTGG CGCAATTGCT CAGCATACAA
AGGCAGATCC ATGGCTGGAC GGCAACCTTA GCCGATTGTT TAGTCAAACC GCAGTTTTGC
CATCGCGACT TAAATCCCCA TAATCTGCTG CTTAAAGATA ACCAGTTGTA TTGCATCGAT
TTTGAGTATA CAACCGCCTC CCATCCACTG TGTGAACTGG CCGTTGTGCT CGCCACGCAC
CAATTAACAC CTGCGCAGCG GCATCTGTTG GTGCGGCAGT ATCTGACTGG ACACCCCGGC
TTAACCTCGG ATGCCATCAA GGCGATACCC GCTGCCATCG AGATGTATTG GGTGTTTGCC
GTGTATTGGG CATTATTGAT GGCAGCGCAC ACCCATGGTG AGCGGCAGCA GGAATACTTC
GACTGGTTCG ATCAATTCTG GCCACTTATC AGCCACGCAT CCTAA
 
Protein sequence
MPPNIGQDKD ALLAVLAQAG LTDISQIQPL ADGLSNHNYH IETPTAHYVL RENADAADSF 
CSREQELFYW RHLAKAKLAP ELLWVSGDQR YYLSQYIFAQ SLPSLPVAHP FAPLMEDVEG
SDNLVIEKDI TASGTYTLER PEVPREPSMA SGHQELSLQN LSLSNLSSKE LSWKELSWKE
LSWKELSWKE LESQCCATTF CQGEAHIEAW LQSHADFKGA ADKQAWYQSE RLALLEALTP
NRAHSLLLQL LQQLREQATG PYHISITEQW QEYHTQLLDF AAADMGEAWQ SRLAQLLSIQ
RQIHGWTATL ADCLVKPQFC HRDLNPHNLL LKDNQLYCID FEYTTASHPL CELAVVLATH
QLTPAQRHLL VRQYLTGHPG LTSDAIKAIP AAIEMYWVFA VYWALLMAAH THGERQQEYF
DWFDQFWPLI SHAS