Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2108 |
Symbol | |
ID | 4258094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2488801 |
End bp | 2490396 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638122776 |
Product | major facilitator transporter |
Protein accession | YP_738153 |
Protein GI | 114047603 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2211] Na+/melibiose symporter and related transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.753085 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCGG ATCAACAAAC GGTTACCCCA TTAGAGAATT TCTCGCCCAA GGTGGCGCAG CGCGCCGTGC ATAGGGTGCA ACCCGAGCTG AATTTCTGGC AAATCTTCAA TATGTGCTTT GGCTTTTTGG GGATCCAATT TGGCTTTGCA CTGCAAAATG CCAACGTCAG CCGCATTTTC CAAACCCTTG GCGCCTCTAT CGATGATATT CCTATCCTGT GGATTGCCGC GCCGTTAACG GGTCTGCTGG TTCAACCTAT TATTGGTTAT CTGAGCGATA ACACTTGGGG GCGTTTAGGT CGCCGCCGGC CATATTTTTT AATCGGCGCC ATTTGTACGA CTCTCGCAAT TTTTGTGATG CCGCATTCCC CTACGTTGTG GATTGCCGCA GGCATGCTGT GGATTATGGA TGCCTCAATC AATATCGCCA TGGAACCCTT CCGTGCCTTT GTGGGGGATA ATTTACCCCC CAAGCAGCGC ACCCAAGGCT ATGCTATGCA AAGCTTTTTT ATCGGCATCG GCGCGGTTGT GGCCTCGGCC CTGCCCTATA TTCTCAGCAA CTTCTTTGCT GTCGCCAATA CCGCGCCCGC GGGCGAAATA GCCGATTCGG TGCGTTATGC CTTCTATTTT GGCGGTGCAG TGCTGTTTCT TAGCGTGGCT TGGACTGTTG TGTCTACCAA AGAATATTCC CCCGATGAAC TTGCCGCCTT CCATGGCAAT GCTGACGCAG GCATAGATGA GCAACAAAAC CGCACACGCA CCCACAAGAA TTATCAATTT GCCGCGATCG TTTGGATGGC CGTAGGCGCA CTGCTGACGC TTGCGGTGTG GACACAGGAT TTAGATAAGC AGCTGTATAT TTTAACCTTA GGGATTTTTG CCTTTGGCCC ATTGCAACTT TACTGCGCCC TGCGTTTAGG CAAATCTACG CCCTCACAGC GCGCGCAACT GGGCATAGTC TTTAATGTGG TCGATGATTT ATTCCATATG CCTAAGGCCA TGCATCAGTT AGCAATAGTG CAGTTTTTCT CTTGGTTCGC GCTCTTTGCG ATGTGGATTT ACACCACTTC GGCGGTGACG TCCTACCATT TTGGCAGCAG CGATGTGTTG TCTAAGGCCT ATAACGATGG TGCCGATTGG GTGGGCGTAC TGTTCGCCTC CTACAATGGA TTTTCGGCCA TTGCGGCCCT GTTTATCCCA CTGCTTGCTA AACGTATCGG CATCAAACTG ACCCACACCT TTAATATGCT CTGCGGAGGT TTTGGGTTGA TCAGTTTCTA TTTTATCAAA GATCCCAGTC TGTTATGGCT GCCCATGATT GGCGTGGGTA TCGCCTGGGC CTCGATTCTC TCCGTGCCCT ACGCCATGTT ATCTGGCGCC TTACCGCCGA AAAAGATGGG CGTGTATATG GGGATTTTTA ACTTCTTTAT CGTGATCCCA CAGCTGCTCG CAGCCAGTGT TTTAGGCTTA ATTCTTAATG GATTATTTGA TGGTCAGCCC ATCTACGCCC TGATCACTGG CGGCGTGCTG ATGCTCTGCG CCGGGATTGC CGTGCTCTTT GTTGAGCAAC CGAATACTCA GCACACTCAA GCGTAA
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Protein sequence | MSADQQTVTP LENFSPKVAQ RAVHRVQPEL NFWQIFNMCF GFLGIQFGFA LQNANVSRIF QTLGASIDDI PILWIAAPLT GLLVQPIIGY LSDNTWGRLG RRRPYFLIGA ICTTLAIFVM PHSPTLWIAA GMLWIMDASI NIAMEPFRAF VGDNLPPKQR TQGYAMQSFF IGIGAVVASA LPYILSNFFA VANTAPAGEI ADSVRYAFYF GGAVLFLSVA WTVVSTKEYS PDELAAFHGN ADAGIDEQQN RTRTHKNYQF AAIVWMAVGA LLTLAVWTQD LDKQLYILTL GIFAFGPLQL YCALRLGKST PSQRAQLGIV FNVVDDLFHM PKAMHQLAIV QFFSWFALFA MWIYTTSAVT SYHFGSSDVL SKAYNDGADW VGVLFASYNG FSAIAALFIP LLAKRIGIKL THTFNMLCGG FGLISFYFIK DPSLLWLPMI GVGIAWASIL SVPYAMLSGA LPPKKMGVYM GIFNFFIVIP QLLAASVLGL ILNGLFDGQP IYALITGGVL MLCAGIAVLF VEQPNTQHTQ A
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