Gene Shewmr7_1762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1762 
Symbol 
ID4256289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2082516 
End bp2083346 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content46% 
IMG OID638122421 
Producthypothetical protein 
Protein accessionYP_737812 
Protein GI114047262 
COG category[S] Function unknown 
COG ID[COG2445] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.254099 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.270022 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATCG AGCAGAGCCA GCATTTTCAC CAACTAAACG CTTTAGCTGC AAGCCATCCG 
AAGGTGGCGG TATTATGGCT GTATGGTTCG CAGGCTAAAG GAAATGCTAG CGAGCATAGC
GATTGGGATT TAGCCGTCGC ATTCGACCCG GTAAAGGCGG ACAGTGTGCT TGATACTCGT
ATTAGAGCTG AATTGCTTGC TATGGATTGG CAAAGGGCAT TGGGGCTAGC CGAAGGGAAG
CTTTCCGTTG TCGATATCAA TCTAGCACCT ATCCCTCTGG CTTTCGGAAT CATTAATGCC
AACAAACTTA TCTTTAGTCG AGATGAAGGT CGAAGAATGC AAGAAAAGTC TCGCATTATG
TCGCAAATGG AACTCGATTA TTCAGCCCCA AGCCACTTTA TTATTTTGGA TAATGCCTAT
ATCACGTCAT TGAGTTTAAG CCTTAGCCAG TACCAAGCCG AGCTTGGAGA GTTACGTCAA
TTACTTAGTC AGCGTCCCCT ATCTAATCTT GAAGAACGCG CAGCAGAGCG CACACTACAG
GTCTCTATTG AAGCTTGTAT TGGCATTGCG AAACATTGGG CTAAAGCACA GGCAGGGCAT
AGTCCGCAGG ATGCCTACCA AGCATTTGAG ATCCTGTGTC AACGAGGTAC ACAACCAGCT
GATGAATTAA ATGGCTGGCG TAAAGTGATA GGCCTGCGTA ATGCACTGGT ACATGATTAT
CTGAATATTG ACCCTGAGAT CATCCGCAGT GTGATCTCTC AAGGTTATAG CGATAGACTA
TTTGTCTTTG CAGAGCAGGG GTTGGAATGG TTATCTTCGA AGAATGACTA A
 
Protein sequence
MTIEQSQHFH QLNALAASHP KVAVLWLYGS QAKGNASEHS DWDLAVAFDP VKADSVLDTR 
IRAELLAMDW QRALGLAEGK LSVVDINLAP IPLAFGIINA NKLIFSRDEG RRMQEKSRIM
SQMELDYSAP SHFIILDNAY ITSLSLSLSQ YQAELGELRQ LLSQRPLSNL EERAAERTLQ
VSIEACIGIA KHWAKAQAGH SPQDAYQAFE ILCQRGTQPA DELNGWRKVI GLRNALVHDY
LNIDPEIIRS VISQGYSDRL FVFAEQGLEW LSSKND