Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1762 |
Symbol | |
ID | 4256289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2082516 |
End bp | 2083346 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638122421 |
Product | hypothetical protein |
Protein accession | YP_737812 |
Protein GI | 114047262 |
COG category | [S] Function unknown |
COG ID | [COG2445] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.254099 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.270022 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTATCG AGCAGAGCCA GCATTTTCAC CAACTAAACG CTTTAGCTGC AAGCCATCCG AAGGTGGCGG TATTATGGCT GTATGGTTCG CAGGCTAAAG GAAATGCTAG CGAGCATAGC GATTGGGATT TAGCCGTCGC ATTCGACCCG GTAAAGGCGG ACAGTGTGCT TGATACTCGT ATTAGAGCTG AATTGCTTGC TATGGATTGG CAAAGGGCAT TGGGGCTAGC CGAAGGGAAG CTTTCCGTTG TCGATATCAA TCTAGCACCT ATCCCTCTGG CTTTCGGAAT CATTAATGCC AACAAACTTA TCTTTAGTCG AGATGAAGGT CGAAGAATGC AAGAAAAGTC TCGCATTATG TCGCAAATGG AACTCGATTA TTCAGCCCCA AGCCACTTTA TTATTTTGGA TAATGCCTAT ATCACGTCAT TGAGTTTAAG CCTTAGCCAG TACCAAGCCG AGCTTGGAGA GTTACGTCAA TTACTTAGTC AGCGTCCCCT ATCTAATCTT GAAGAACGCG CAGCAGAGCG CACACTACAG GTCTCTATTG AAGCTTGTAT TGGCATTGCG AAACATTGGG CTAAAGCACA GGCAGGGCAT AGTCCGCAGG ATGCCTACCA AGCATTTGAG ATCCTGTGTC AACGAGGTAC ACAACCAGCT GATGAATTAA ATGGCTGGCG TAAAGTGATA GGCCTGCGTA ATGCACTGGT ACATGATTAT CTGAATATTG ACCCTGAGAT CATCCGCAGT GTGATCTCTC AAGGTTATAG CGATAGACTA TTTGTCTTTG CAGAGCAGGG GTTGGAATGG TTATCTTCGA AGAATGACTA A
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Protein sequence | MTIEQSQHFH QLNALAASHP KVAVLWLYGS QAKGNASEHS DWDLAVAFDP VKADSVLDTR IRAELLAMDW QRALGLAEGK LSVVDINLAP IPLAFGIINA NKLIFSRDEG RRMQEKSRIM SQMELDYSAP SHFIILDNAY ITSLSLSLSQ YQAELGELRQ LLSQRPLSNL EERAAERTLQ VSIEACIGIA KHWAKAQAGH SPQDAYQAFE ILCQRGTQPA DELNGWRKVI GLRNALVHDY LNIDPEIIRS VISQGYSDRL FVFAEQGLEW LSSKND
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