Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1283 |
Symbol | |
ID | 4258173 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 1489478 |
End bp | 1490971 |
Gene Length | 1494 bp |
Protein Length | 497 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638121916 |
Product | extracellular solute-binding protein |
Protein accession | YP_737339 |
Protein GI | 114046789 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTACTTA TTAGCATGTT AACCCTTGTA TCTAAGGAGT CATTCTTGTT AAGACCTTTA TCGCTCCTAT TTATTGGATT TGGGTTAACG CTAGCAACAT CAGCCTTAGC GGAATTTTCC TTAGCACAAA TTCCGCCCCT ATCGAATAAA ACCCCCATCA CTTTAGTCGC CGAAAAAGGC TTTTGGACTG ATTACCTGAC ACGGGAAATG TTGCCTAAAT TTACCGAAAA AACTGGTGTT AAAGTCAATG TGGTCAGTAC CGAACTAGAA GGCATGTTCG AGCTACAAAC CCACGCATTA CTGCAAGGCG AAGGAAAATA TGATCTGCTG AGCATGGAGG CTGGCTGGGC AAAAGAGTGG GCGGCTAACG GCTATACTGT TCCCCTGTTG GAATTAGCCA AACTCTACGA TCCCGATGGT GAAAAGGCGA TGGAAAGCTA TCTCGAACCT TACTATCTGT CGCTACTTAA TATTTTGTCC TATCACGGCG AGCTACATGC CATCCCCTAC AATAACTATG TGATGGGGAG TCATTACCGC GCGGATTTAT TTGAGAATAA AACCGAACAA GCTCAGTTTC AGCAACGCTT TGGTTACCCA CTCAAACCCG CGACTAATTT CGATGAACTA CAGGACCAAG CGGTATTTTT TACCCGAAAA GCAGGCGAAC TGCTTGCGGG CAAGCCCTTA AGCCACGACT TTTATGGCTT GGCATTAATG TCTGGCAACA AGCCCCATAT TAACGATGAA TTTTCGAGTA TTATTTGGAG CTTAGGTGGC GCTTGGATGT GGCCCATCTA TAACCCACAA AAACAGCTAA CCCATTTCGA GGTCCCAGCC GTTAATCTAG AGGCGATAAA AGCGGGAAGC ATTTACCGAA AGCTGATGCC CTACGCCATT CCTGCGGATG ATAAGTTTGC CTTCAATGAA GCGGCCAATG CACTGGCAAG CGGACAAGTG GCGATTTGGC CCTTTGCCTA CAACAATCTC TGGTCGGTCT CCTTTAAAGT CGAGGCCAAT GTGCCAGGCG CTCGGCTTGG CGTGGCTCAA GTGCCTGGCG GCATGCCCTA TAACGGTGCC TACGCTTTTG CCGTGAGCTA CGACAGTAAA AATCCGCAAG CCGCCTATTG GTTACTCAAA TACATGGGCA CCTATGAAGC CCAATATGCC TACGCCCTCG GCGGCGGCAA TCCCTGCAGA ATGGATGTGG TCACAGCGCC AGAATTTAAA CAAGCCTCTA AGAGATCCAT TGCTGGCGCC TTTGAGGCGA GCCAAATTGC TAACTTATTT TGGTCTACTA AAGTATTGGA AGTAGGACAC TTTACCACTA CCGCTATGGG GCAGATTTAT CCCGAATTAA GTCATGCTTG TTATGCAGCA AGCCGACACG AAGCCAACAG TACCGATATT TTTATTGAGT TAAGCAGCAA AATTAAACAC CTGCAGAATA CCTATGGGGA AGTGCCTGCA ATTGATAAGA AAAATAACCA ATGA
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Protein sequence | MLLISMLTLV SKESFLLRPL SLLFIGFGLT LATSALAEFS LAQIPPLSNK TPITLVAEKG FWTDYLTREM LPKFTEKTGV KVNVVSTELE GMFELQTHAL LQGEGKYDLL SMEAGWAKEW AANGYTVPLL ELAKLYDPDG EKAMESYLEP YYLSLLNILS YHGELHAIPY NNYVMGSHYR ADLFENKTEQ AQFQQRFGYP LKPATNFDEL QDQAVFFTRK AGELLAGKPL SHDFYGLALM SGNKPHINDE FSSIIWSLGG AWMWPIYNPQ KQLTHFEVPA VNLEAIKAGS IYRKLMPYAI PADDKFAFNE AANALASGQV AIWPFAYNNL WSVSFKVEAN VPGARLGVAQ VPGGMPYNGA YAFAVSYDSK NPQAAYWLLK YMGTYEAQYA YALGGGNPCR MDVVTAPEFK QASKRSIAGA FEASQIANLF WSTKVLEVGH FTTTAMGQIY PELSHACYAA SRHEANSTDI FIELSSKIKH LQNTYGEVPA IDKKNNQ
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