Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0845 |
Symbol | |
ID | 4256638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 961338 |
End bp | 962882 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638121456 |
Product | OmpA/MotB domain-containing protein |
Protein accession | YP_736901 |
Protein GI | 114046351 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.157754 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTATGA TATCTAATTT CAAACCTATC GTAGTAGCAG TTACTTCTGC ATTGTTACTT AGTAGTTGTG CGGTTACGCA GTCGGTAGAG AATAATAAAG AAACAGTTAT TGGTTGTGCC ATTGGTACTG GTATAGGTGC ATTAATCGGT AACTACATAG GTGGGAAAGA AGGTATGGCC TATGGTGCAG CAGCAGGGGC TGCCATTGGA TGCACAGTCG GTTACGATTT TCAAAAAAAA CGTGAAGCAC TTGAGGCATT AGCCAAAACT GAAAATCTCG ATATTCAATT CACTTCAATC AGTGCATCAA CCAATGCAGA TAACCAACAA AATAGCTTAT TGATCAGTGC TAATAATCAA GCGATGTCAA AGGAAGATCA GGAAAAATAT TCTGATTATC AAGTCGTAGG TATGGCCGCG ACAATTTCTA GCACCGATGA AATGATGTTT GGCTCAGGCT CTGCGGAAGC GACAGCACAG GCAAAACAGA AATTACAAAA ATTAGCCGCT ATCTATAAAG ATTCTAAACA GAACATCCTT ATTACAGGTC ACACCGATGC AAGTGGCAGT GAATCGTTGA ATCAGACGTT AAGCGAAGCT CGCGCGCGTT ATGTTGCCAC GCTTTTTAAC CAGGCAGGCA TTCCGACAGA AAGATTATTT TTCCAAGGCG CAGGTGAATC ACAGCCTGTA GCGGCCAATA CTAATGAAAC TGGTAAGGCT AAAAATCGTC GGGTGGAAAT TGTTGAAATT GAGGGTAAGC CAGAGCAGCT TCTGGCTTAC TCTAACAAAC AAAAAACTAA TCTCAGTTAT TTATCTCGTC GCTCACAGGA TAAGGTTGCT ACGGTCAAGC CGAGTGAAAC CACCGCAAAA TCTGTTGATG TTGCAAGTAA AGATGCACAA ATCACCATGA CGCAATCTGA GATGGTGCAA TTAATTGAGC CTGCAAAGCA GCAAAAGGCT TTAGTGGATT TTGGTGGTCA AAAAATGACG GATCCATCGA CTAACTTTGC TCAATTGGTC GGAACGAAAA AAGAAAGCGG ATTTGCATTA TTTAGTAATG CCTATGCATC CGAAATATCG AGCCTTAACT GTGCTGTCGA AGGACCAAGA GTGGCTGGAG ACGTGAAAAG TTTAGCGACG GGTGAGAGTT ATAATCGCCA AGATTACAAT ACTGCTGATT ACTTACCAGG GATGAATGGT ACGGTTTGGG TCAACAAAGT GAATGGTCAC TACATTGGTT TGTCCCCAGT TGCTGTGATT AAAGATAGCG GCACGGCCGT TGCGGCGCCT AAAGTGAATA TTTGGAAAAA CTATAAGGGA GCAAGTCAAG AAGCGCCTAG TTATGAGCTA TCAAGCCATG TTGAAACCTA CTATGGCGAT AGGGGGTTGT TATATCGGAT TTTTACCACA GATAAAGATT CTCCAGTACG TTGCATAGAT GTGGTAATGC CGATTGACAG GTCAGCTACA GCAATTACAG GTAAGTTGTA TTACGAAAAA AATAAGACCG TTTATGAAGC AGGTTTTGAA CCTAAATTGT TATAA
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Protein sequence | MTMISNFKPI VVAVTSALLL SSCAVTQSVE NNKETVIGCA IGTGIGALIG NYIGGKEGMA YGAAAGAAIG CTVGYDFQKK REALEALAKT ENLDIQFTSI SASTNADNQQ NSLLISANNQ AMSKEDQEKY SDYQVVGMAA TISSTDEMMF GSGSAEATAQ AKQKLQKLAA IYKDSKQNIL ITGHTDASGS ESLNQTLSEA RARYVATLFN QAGIPTERLF FQGAGESQPV AANTNETGKA KNRRVEIVEI EGKPEQLLAY SNKQKTNLSY LSRRSQDKVA TVKPSETTAK SVDVASKDAQ ITMTQSEMVQ LIEPAKQQKA LVDFGGQKMT DPSTNFAQLV GTKKESGFAL FSNAYASEIS SLNCAVEGPR VAGDVKSLAT GESYNRQDYN TADYLPGMNG TVWVNKVNGH YIGLSPVAVI KDSGTAVAAP KVNIWKNYKG ASQEAPSYEL SSHVETYYGD RGLLYRIFTT DKDSPVRCID VVMPIDRSAT AITGKLYYEK NKTVYEAGFE PKLL
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