Gene Shewmr7_0798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0798 
Symbol 
ID4256399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp910700 
End bp911560 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content50% 
IMG OID638121410 
ProductHemK family modification methylase 
Protein accessionYP_736855 
Protein GI114046305 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID[TIGR00536] HemK family putative methylases
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.152142 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTGATC AATCGAGTAT CGCCGAGGCC CTGCAATGGG CCTACGTACA GCTTGCGCCT 
ACCTCTGAAT CCGCCCATCT GGATGCAGAG GTTTTCCTGC TGTATTGCCT CAATAAAAGC
CGTGCATTTC TCTACACTTG GCCCGAAAAA GCGTTAACGG TGGAGCAATG GAAACGTTTC
CAGCAAATGG TGCAACGTCG CCAGCAGGGC GTACCCGTGG CACATATTGT GGGTGAGCGT
GAGTTTTGGT CGCTGCCATT TATCGTGAAT GACACTACCT TAATCCCTCG CCCCGATACC
GAAATCCTAG TGGAAACCGC TTTAAACTTG CCCCTTGAGA GCAATGCTAA AGTGCTCGAT
TTAGGTACCG GAACAGGTGC TATTGCGCTG GCGCTGGCTT CTGAACGTGC TACCTGGCAA
ATCACCGCCG TCGATAAAGT GGAAGAAGCG GTAGCATTAG CCAAGGCGAA CCGGACAAAT
CTTAAGCTCG AGCAGGTGGA GATCCTCCAA AGTGACTGGT TTAGCGCTAT CAAGGCCCAT
GACTTTGATT TAATTGTCTC AAATCCGCCT TACATTGATG AGGCCGATGA GCATTTACAT
CAAGGTGATG TACGTTTTGA GCCGCAAAGT GCGCTCACTG CCGCCGATGA GGGCTTTGCC
GATCTTTACT ACATAGCCAA AACCGCTCGG GATTATTTAA AGCCCAACGG CTATATTCTG
CTCGAACATG GTTTTGAGCA GGCGGTAAAG CTTAGAGAAA AACTGACCGA GCTGGGTTAT
CAGAATGTCG CGACCGTGCG GGATTTTGGC AGCAACGACA GATGCACTAT GGGTAAGTGG
ATGGGCTTGA TTGGTATTTA A
 
Protein sequence
MADQSSIAEA LQWAYVQLAP TSESAHLDAE VFLLYCLNKS RAFLYTWPEK ALTVEQWKRF 
QQMVQRRQQG VPVAHIVGER EFWSLPFIVN DTTLIPRPDT EILVETALNL PLESNAKVLD
LGTGTGAIAL ALASERATWQ ITAVDKVEEA VALAKANRTN LKLEQVEILQ SDWFSAIKAH
DFDLIVSNPP YIDEADEHLH QGDVRFEPQS ALTAADEGFA DLYYIAKTAR DYLKPNGYIL
LEHGFEQAVK LREKLTELGY QNVATVRDFG SNDRCTMGKW MGLIGI