| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0730 |
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| Symbol | |
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| ID | 4255119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 840836 |
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| End bp | 841042 |
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| Gene Length | 207 bp |
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| Protein Length | 68 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 638121341 |
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| Product | TraR/DksA family transcriptional regulator |
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| Protein accession | YP_736787 |
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| Protein GI | 114046237 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02419] phage/conjugal plasmid C-4 type zinc finger protein, TraR family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00565405 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.112196 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATGCAG TGGATTTAGT CACCCGTGAG CAGCTACGCG CCGAGCACCG TTTTGAGCAG
CAACGCAAAG CGCAAGCCGC CAAGCCAGTA CCACCAAGCG CAACGGACTG CGCCGAGTGT
GGAGATGAAA TACCAGAAGG CCGCAGACAA GCAATTTTAG GTGTACGTCT ATGTGTGACG
TGCCAAACGT GGAGAGAAAG CCAATGA
|
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| Protein sequence | MDAVDLVTRE QLRAEHRFEQ QRKAQAAKPV PPSATDCAEC GDEIPEGRRQ AILGVRLCVT
CQTWRESQ
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