| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0657 |
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| Symbol | |
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| ID | 4256188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 769000 |
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| End bp | 769878 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638121271 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_736717 |
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| Protein GI | 114046167 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.65557 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCCCG CCATGCCTGT GTTCAAGGCA TGGATAAAGG ACTGTGACGG GATTTTAAAG
CATCGGGAGA CAAGCAATAT GGCGGTTGAA CACTCAAGCT TAAAGGGTAA GGTAGGGCTG
ATCACCGGCT CCACCAGTGG AATTGGTTTA GCAACGGCCC ATGTGCTGGC GGAGCAAGGT
TGTCATCTTA TCCTGCACGG CTTAATGCCC GAAGCCGAGG GGCAATGCTT GGCGGCGGAT
TTTGCCGAGC AATATCACAT TAATACTTTC TTCAGTAACG CCGATCTGCG GGATCCCGAG
AGCATTCATG CCTTTATGGA TGCAGGCGTT AATGCTCTGG GCAGTATTGA TATTTTGGTG
AATAACGCCG GTATTCAACA CACTGAAAAT GTTGCTCATT TCCCGATTGA TAAATGGAAT
GACATTATCG CCATTAACCT GTCCTCGGCC TTTCATACCA TTCAACAAGT CGTGCCTGCG
ATGGCCGAAA AGCGTTGGGG TCGCATTATC AATATCGCCT CTGTGCATGG TTTAGTGGCC
TCGGTCAATA AGGCGGCCTA TTGTGCGGCT AAACACGGGA TTGTCGGCCT AACCAAAGTC
GTGGCCATCG AGTGCGCCGA GCAGGGGATT ACCGTCAATG CGATTTGCCC TGGCTGGGTG
GATACGCCGC TGATCAACAA GCAGATTGAG GCTATCGCTA GCAATAAGGG CTTAAGTTAC
GACGAGGCTA AGTATCAACT CGTCACGGCA AAACAACCCC TGCCAGAGAT GCTCGACCCG
CGTCAGATTG GTGAGTTTGT ACTGTTTTTA TGTAGCAGTG CGGCGCGGGG GATTACCGGC
GCATCGCTGG CCATGGACGG CGCCTGGACC GCGCAGTAG
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| Protein sequence | MRPAMPVFKA WIKDCDGILK HRETSNMAVE HSSLKGKVGL ITGSTSGIGL ATAHVLAEQG
CHLILHGLMP EAEGQCLAAD FAEQYHINTF FSNADLRDPE SIHAFMDAGV NALGSIDILV
NNAGIQHTEN VAHFPIDKWN DIIAINLSSA FHTIQQVVPA MAEKRWGRII NIASVHGLVA
SVNKAAYCAA KHGIVGLTKV VAIECAEQGI TVNAICPGWV DTPLINKQIE AIASNKGLSY
DEAKYQLVTA KQPLPEMLDP RQIGEFVLFL CSSAARGITG ASLAMDGAWT AQ
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