| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0569 |
|---|
| Symbol | |
|---|
| ID | 4258004 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 665555 |
|---|
| End bp | 666985 |
|---|
| Gene Length | 1431 bp |
|---|
| Protein Length | 476 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 638121183 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_736629 |
|---|
| Protein GI | 114046079 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCATG CAATCAGTGC ACTGAGCTGC GACAAAACGC TATCTGGCAG CAGAGTGCGA
GTATCGATAA AGCCTGTCAT CGGCAGTGCG AGATTAATGG CTAGAAGAGT CATCGCTTTG
ATGTTCATCA CTTTGATACT GAATGGTTTG CTGCTCGTAA CCCATGCCCA TGCGCAGACG
GACGAAGCTC TACCGACCGA GCCCGCCCCC GCGGTCAAAG TGAAGGCGTG GTTGGGTGAC
AAACCGGATG CAAATCCCGA TGGAACTCAA AAGCTATGGG CGCCGACGGA GCAGATATTG
TTGCAGATTG AGGTGTCGAC CAACCGCTGG TTTACCTCGG GCACTCAGAT AAAGGGCATT
GAAATCCCCA ATGTGTTAGT GAAGCAACGC AATACCTTTG CCGTTAACTA TACCGAGCGG
GAAGACGGCC AGACTTGGTC GCGGCAGCGC TGGGAAATCG CCCTCTATCC ACAAACCAGC
GGTGACTTTA GCGTGCCAGA AGCCACAGTC ATCACTCAGG TGGCTGGCGC CAATGGCGAC
AAACAAGCCG TCACGCTTAC GACCCCTGCG ATGGGATTTC GGGTGGCTCT GCCCAGTGCC
GAGCTTGCCA GCACAAAGGC TTGGTTTGCG GCATCGGATG TTAAAGTGCA GCAGGAGTGG
AGCCCAAATG AGGCTGAGGT GCTCAAGGTG GGGGATAGCC TAGTGCGCAC CATTAATATT
GAGGCCAATG ATTCCCTATC TGTGCTGTTG CCCAATCTTA TGACGGCGCA AGCTTCTCCC
GATTGGAAGC TGTATCCCAG TTCTCCCGAG CTTGTGGATA AACAAAGCCG TGAAGGTTAT
GTGTCGAGCC GAATCGATAG CCAAGCCTAT GTGTTGCAAC ATGGTGGCGA TGTGAGCTGG
CCCGAGTATC GACTCTGGTG GTGGAACACT CAAAGCGGCC AGTTGGAGCA GATAGTGTTG
GAAGGGAAGA CTATTAAGGT CAAGCATACC CTGAGTTCTT GGTTGAAGTA CCACGCATGG
ACACTGTTCA CCCTGCTGTT AAGCGCGGCG ATATTGGGGT TATTGATGTG CTGGGGGAAA
GCGTATTACC AAACCCATCC TATTCCTGTG TGGTTAGTGT TTTACCGCGC TCTGCGCCGA
GGAGAGTGGC AAACCTGTCG AGCACTCTTG TACCGACGCT TACGTCGGCG CAAACAATTA
CTGTCGATGA CAGCGGTATC CACAGAGCCA GATTGGCAAG CTGCTGCCCT GAGGTTACAA
ACCCATTCGA CTCGTCGGGC GGATTTTATC TATCTCTGGA AGCGCATTAA GCGAGTCCGA
ATGGGGTTGG CCTTACCTAA GGCCCTCGTC GCATTAGAGA CGCAACCCTT ACTAACCGAA
AAAGTAGCCG CTGAAAAAGC GTTATCTGAA CCCAAAGCCT CTGAGTCATA G
|
|---|
| Protein sequence | MSHAISALSC DKTLSGSRVR VSIKPVIGSA RLMARRVIAL MFITLILNGL LLVTHAHAQT
DEALPTEPAP AVKVKAWLGD KPDANPDGTQ KLWAPTEQIL LQIEVSTNRW FTSGTQIKGI
EIPNVLVKQR NTFAVNYTER EDGQTWSRQR WEIALYPQTS GDFSVPEATV ITQVAGANGD
KQAVTLTTPA MGFRVALPSA ELASTKAWFA ASDVKVQQEW SPNEAEVLKV GDSLVRTINI
EANDSLSVLL PNLMTAQASP DWKLYPSSPE LVDKQSREGY VSSRIDSQAY VLQHGGDVSW
PEYRLWWWNT QSGQLEQIVL EGKTIKVKHT LSSWLKYHAW TLFTLLLSAA ILGLLMCWGK
AYYQTHPIPV WLVFYRALRR GEWQTCRALL YRRLRRRKQL LSMTAVSTEP DWQAAALRLQ
THSTRRADFI YLWKRIKRVR MGLALPKALV ALETQPLLTE KVAAEKALSE PKASES
|
|---|
| |