Gene Shewmr7_0420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0420 
Symbol 
ID4256654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp478026 
End bp479354 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content48% 
IMG OID638121034 
Productglycosyl transferase family protein 
Protein accessionYP_736480 
Protein GI114045930 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAT TCAACACTAT CGGCTACATG GTGCTCGATA TCTGGCACCA ATTGGCTGAA 
CACTTAAGCT TTTTCGCTTG GCTGGTGCCG CTCATTCTGT TGTATGAGGC GCCGCTGATG
TTGTTGGTGC TCACTGGTAT TATGCGGTTT TACTACACCA ACTTCGTACA AGTGCCTCGG
CAGTCGCTAT ATAAACCTAA AGTGTCCTGC GTGATTACCT GTTATGCAGA GGGTGAAGCC
GTCAAATCGA CAATCGACTC CTTCATCGAA CAGGTTTACG ACGGTGAGAT TGAGATTATT
GCCGTTGTCG ATGGCGCCGT GCAAAACGCC TTGACCTATC AAGTGGCGAT GGCGGCGGCC
AAGGCCTGCC AAGTGCCAAA TCGCAAGGTG GTCGTATTGC CTAAGTGGCA GCGCGGTGGC
CGAGTGTCGA CCTTAAATGC GGGTCTATCG GTCGCCACGG GGGAAATTGT TATCAATGCC
GATGCGGATA CTTCCTTCGA TAACGATATG GTGTCGCAGA TTGTGCCCTA TTTTGAAGAT
CCCAATGTGC CCGCCGTCGG TGGCGCATTA AGGGTACGCA ATGTGAATGA ATCGATACTG
ACTCGCATGC AATCGATTGA GTATCTGATC TCAATGCAGG GCGGCAAGAC TGGGCTTGGA
CAATGGAATC TGCTGAATAA TATCTCCGGG GCTTTTGGTG CCTTTAGACG GACTTTTTTA
ATTCAAATTG GTGGCTGGGA TACCCATACC GCCGAAGATT TAGATTTAAC CGTGAGGATC
AAACAGTACT TCAAGCGTTA TCCCGATTGG CATATTCCGT TCGCGACTTT GGCTATAGGC
CACACAGATG CACCGGCCGA TCTCAAAACC TTAGTATTAC AACGCCTGCG TTGGGATGGG
GATTTGCTTT TCCTGTATTT TCGTAAACAC TGGCCGGCCT TTACGCCTAA GTTACTGGGC
ACCGGAACCT TTATCTTTAC CTTGCTCTAT GGCTTCTTGC AGAACGTGTT GATGCCCTTT
GTCATCGTAT TTTATTCCAT CGGGATAGTG CTGAGTTATC CGTGGCAGTT TATTACCTCC
ATTTCGCTCA CGATTTATGG CTTCTATTTT GTCATCTTAG TGTTCTTCTA CTTGATGGTA
TTACTAGCGA TTTCGGAGCG GCTGTCCCAG GATTTACGTC TAGCCATTTG GTTACCTTTA
TATCCGTTTT ATGCGCTGTT TATGCGCTTA GTGTGTCTCT TTGCACTCAT GAACGAAGTT
TTTCGCCGCT CCCATGAAGA AAGCTCAATG GCGCCATGGT GGGTATTGAA ACGTGGGAGA
AAGTTTTAA
 
Protein sequence
MSEFNTIGYM VLDIWHQLAE HLSFFAWLVP LILLYEAPLM LLVLTGIMRF YYTNFVQVPR 
QSLYKPKVSC VITCYAEGEA VKSTIDSFIE QVYDGEIEII AVVDGAVQNA LTYQVAMAAA
KACQVPNRKV VVLPKWQRGG RVSTLNAGLS VATGEIVINA DADTSFDNDM VSQIVPYFED
PNVPAVGGAL RVRNVNESIL TRMQSIEYLI SMQGGKTGLG QWNLLNNISG AFGAFRRTFL
IQIGGWDTHT AEDLDLTVRI KQYFKRYPDW HIPFATLAIG HTDAPADLKT LVLQRLRWDG
DLLFLYFRKH WPAFTPKLLG TGTFIFTLLY GFLQNVLMPF VIVFYSIGIV LSYPWQFITS
ISLTIYGFYF VILVFFYLMV LLAISERLSQ DLRLAIWLPL YPFYALFMRL VCLFALMNEV
FRRSHEESSM APWWVLKRGR KF