| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0312 |
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| Symbol | |
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| ID | 4258309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 343105 |
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| End bp | 344298 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 638120918 |
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| Product | methylitaconate delta2-delta3-isomerase |
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| Protein accession | YP_736373 |
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| Protein GI | 114045823 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2828] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02334] probable AcnD-accessory protein PrpF |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGA ATCCGTTTCC GCCCCAAATT AAAGTTGCCG CCACCTATAT GCGCGGCGGT
ACCAGTAAAG GGGTGTTTTT CCGTTTACAG GACTTACCCG AAGCAGCCCA AGTACCCGGC
CCAGCTCGAG ATGCCCTGCT CCTTCGCGTG ATAGGCAGTC CCGACCCCTA TGGCAAGCAA
ATTGATGGCA TGGGCGGCGC CACCTCAAGC ACCAGCAAAA CCGTTATTCT GTCGAAAAGC
AGCCAAGCCG ACCACGATGT CGACTATCTT TTTGGCCAAG TATCAATCGA CAAACCTTTT
GTCGATTGGA GCGGTAACTG CGGCAACTTA ACCGCCGCCG TGGGCGCTTT TGCTATCAGC
AATGGGCTGA TTGACGCTGC GCGCATTCCG CAAAACGGCG TCTGCACAGT GCGTATTTGG
CAGGCCAATA TTGGTAAAAC CATTATTGCT CATGTCCCTA TCACAAATGG TGAAGTACAG
GAGACAGGCG ATTTTGAGCT GGATGGTGTG ACCTTCCCCG CCGCCGAAGT GCAGATCGAA
TTTATGAACC CCGCCGCTGA CGAAGACGGC GATGGTGGCA GTATGTTCCC TACGGGTAAC
TTGGTGGATG TACTCGAAGT GCCTGGCATT GGCAGCTTTA ATGCGACCAT GATTAACGCG
GGAATTCCGA CCATTTTCAT CAATGCCGAA GACTTAGGTT ACACGGGCAC TGAGCTGCAG
GACGATATCA ACAGCGATAA TGCCGCTCTA GCCAAGTTTG AAACCATTCG TGCCCATGGC
GCGGTGCGCA TGGGACTTAT CAAGCATATT GATGAAGCAG CTTCGCGCCA ACATACCCCT
AAGGTGGCCT TTGTTGCTAA GCCGAAAAAC TATGTGTCAT CCAGTGGAAA AGCCGTAGCG
GCAGAGGAGA TCGATCTGCT GGTACGCGCC CTCTCCATGG GCAAATTGCA CCATGCGATG
ATGGGCACAG CCGCCGTAGC CATTGGTACA GCGGCGGCGA TTCCCGGCAC TTTAGTCAAT
CTCGCGGCAG GCGGTGGTAA GAAGGAAGCG GTACGTTTTG GCCACCCTTC AGGCACCCTT
CGCGTCGGCG CTCAGGCCAT GCAAACAAAC GGCGAATGGA CTGTCGTCAA AGCCATTATG
AGCCGCAGCG CCCGCGTGCT GATGGAAGGC TTTGTTCGCG TACCAACGGC TTAA
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| Protein sequence | MSKNPFPPQI KVAATYMRGG TSKGVFFRLQ DLPEAAQVPG PARDALLLRV IGSPDPYGKQ
IDGMGGATSS TSKTVILSKS SQADHDVDYL FGQVSIDKPF VDWSGNCGNL TAAVGAFAIS
NGLIDAARIP QNGVCTVRIW QANIGKTIIA HVPITNGEVQ ETGDFELDGV TFPAAEVQIE
FMNPAADEDG DGGSMFPTGN LVDVLEVPGI GSFNATMINA GIPTIFINAE DLGYTGTELQ
DDINSDNAAL AKFETIRAHG AVRMGLIKHI DEAASRQHTP KVAFVAKPKN YVSSSGKAVA
AEEIDLLVRA LSMGKLHHAM MGTAAVAIGT AAAIPGTLVN LAAGGGKKEA VRFGHPSGTL
RVGAQAMQTN GEWTVVKAIM SRSARVLMEG FVRVPTA
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