| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0117 |
|---|
| Symbol | |
|---|
| ID | 4256337 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 131521 |
|---|
| End bp | 133179 |
|---|
| Gene Length | 1659 bp |
|---|
| Protein Length | 552 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 638120713 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_736180 |
|---|
| Protein GI | 114045630 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0303464 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.132893 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCTATC TTCTCGCTAG CTGTATCGCA CTATTAATCG GACCACTGTT TTATCGCTAC
TTTTCATCGG GCAGCGGCTT ACAGAAGGGG CTCGATGGCT TTATCTTCGT CTCCTTAGGC
GGATTAGTGC TGATCCATAT TCTGCCGGAA TTACTCGAGC ACGGCGGCCT ATTGGCTATA
GTCTTTGTGG TGCTCGGCCT GTGGGGGCCG ACCGCCAGCG AACGCTTATT CCATCGCTAC
TCAGAGATCA CCCATAATCT AACCCTGTCA CTCGGGATTG GCGGTCTTTT ACTGCATACA
ATCACAGATG GCGGCGCTAT GGTGCTGGCG CAGCAGGATG GCAATTCCAC CCTATTGGCG
CTTGGGGTGA TATTGCACCG ACTACCCGTG GGTCTCGCCA TTTGGTGGTT ACTCAAACCT
CAAGTCGGCA CCCGTTGGGC GAGTTTGGTA TTAGTCGCCA TGATGCTGCT CACAGGCGTG
GGTTATTTCG CGGGCGAGCA ATTATTATCC CAACTCAGTT TAGATAATAC CGTTTATTTA
CAAGCCTTTG TAACAGGTTC AATCCTGCAC GTCGTGCTGC ATCAACCCCA TGGTCAACAC
GATACCGATA AGCAAGGCCA GTATGAATAT CAGGCCGGTA TCGGCAGTTT ACTGGGGATT
GGATTGTTAA TGGTGCTACT ACTGATGGAT TCTGGCGGCC ATGAACATGC CCACCACGAT
CACAGCACCG AACAACTAAC CACCTGGTTA ATGACCATAG CACCGGTACT TTTACTCAGC
TACGCCGCGG CCGCGCTGCG ATTCAAGCTA GGCTTAACTC CACAGGATAG CAGCCTTGCT
CGCCGTTGGT TCCAACGCTT AGCGGGCCCT GAGGCGCTCG TGCTTACGGC ATTGCTGCTC
GGCCCTTGGC TGGCGCTATT CCAGCTACTC GTGGTGTTTA TTATGAGCGC TTATCTGGCC
CATGCTCGGG TCGAGATAAC CGATCCCCAC AGCAAATTGC CCAATAATGC GTTGCGCTTT
GGCTTTGCCC ATCTGGTCGA TCGCAGTGCC CCTTGGGTGC TCCTCAGCCT AGTGCTAGTC
AATCTGATCG GTCACCCCTC GGTGCCGTTA AGCAATCCTA TGCTACAGAT TGCCGTACTC
TTGCTGGTCT TTTTACCCAT GCGCTTCTGT AACTTAGGCG CAGCAGTGCT GTCGATTGCC
CTCGCCTATA GTGGCTGGAG TCCTTTGGCT ATTATATTGC CTCTGATTGC CGCGCCCGTG
CTGAACTTCG CCCAGCTTAA ACTCATGAGC TGGCCGCAGC GCGGTATTTT GCTGGCAATA
ATCGCCGTAT CACTTGTCGC AGCGCTTAAG TTGCCCATGT GGTTCTCGAT GATCACTTTA
CCCGAGGCGA TTAACTTAGC TGCACTATTT ATCCTATCTG CCTTATTTGC CGCGAGCTTA
CTGCGCCTAG GACCTCGTAA GTTCTTGCGC CGTTTAATGT TGCTAAAACC TGCAGCCCAT
GGTCATCATC ACGGACACGC TCATGCTCAC GCGCATACCC AGGCAGCAGA AGCGTCACAT
GGGCACGGAC ATAGCCATAC ACAGTCTCAT ACACACAGTC AGAACCATAG TCACGACCAT
GATCATTCCC ATGGTGATGG CAATAAGCAC CACCACTAA
|
|---|
| Protein sequence | MLYLLASCIA LLIGPLFYRY FSSGSGLQKG LDGFIFVSLG GLVLIHILPE LLEHGGLLAI
VFVVLGLWGP TASERLFHRY SEITHNLTLS LGIGGLLLHT ITDGGAMVLA QQDGNSTLLA
LGVILHRLPV GLAIWWLLKP QVGTRWASLV LVAMMLLTGV GYFAGEQLLS QLSLDNTVYL
QAFVTGSILH VVLHQPHGQH DTDKQGQYEY QAGIGSLLGI GLLMVLLLMD SGGHEHAHHD
HSTEQLTTWL MTIAPVLLLS YAAAALRFKL GLTPQDSSLA RRWFQRLAGP EALVLTALLL
GPWLALFQLL VVFIMSAYLA HARVEITDPH SKLPNNALRF GFAHLVDRSA PWVLLSLVLV
NLIGHPSVPL SNPMLQIAVL LLVFLPMRFC NLGAAVLSIA LAYSGWSPLA IILPLIAAPV
LNFAQLKLMS WPQRGILLAI IAVSLVAALK LPMWFSMITL PEAINLAALF ILSALFAASL
LRLGPRKFLR RLMLLKPAAH GHHHGHAHAH AHTQAAEASH GHGHSHTQSH THSQNHSHDH
DHSHGDGNKH HH
|
|---|
| |