Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3869 |
Symbol | |
ID | 4254432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 4618525 |
End bp | 4619250 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638120514 |
Product | hypothetical protein |
Protein accession | YP_735989 |
Protein GI | 113972196 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.013789 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGATCAT TTCTTGCGGC CTTGTGTTTT AGTTTATTGA GTCTGTGTGC CTACGCGACA CCGGCTAAGC CCGTGGTGAT CCATCTGGTC ACGGCTTCGT GGCAGGGTTT CGCGGATCCC GATGAGACGG GTTATTACTT TGATATCCTT CGCCGGGTGT TTCCGGCCCC CGATTGGCAA CTCGATGTGC AGTTTATGCC CTTCGCCCGC ACGCTTTATC TGGTTGAAAC TAATAGAGTC GATATGGTCC TCAGCGTCTA CAAAGGGGAT GTAAAAAACA GTTTGCTGAG TGAAAACCCC GTTGAACTCG ATTCTATCGA TGCCGCTGTT ACCCCTCAAA TTGCCGCGAC TTGGTCAGGG ATGGAGAGTT TATCCCATAA GAAAGTGCAA GCCATGCTGG CTTATCGCTA TAACATGCTG ACGACCACTC CCATGTTTTA TGAGGAAGGC AGCGATATTT TAAACATGCT AAATAGTGTG AATGCGGGGC GCACCGATGC TGTGCTGGAT TACAGGAAGA ATATCGAGGC TCTCGTCCCT CAGTTGAAGG CGCCGCAGCA GTTTGTGATT ATTCAAGGGG TATTAAAAGC CGAAACTTAT TTCGCCTTTG CTAACACAGA AAAGGGGAGA ATGTTAAAAC AACATTTTGA TATTGAACAT AAAAAACTGA TTGATTCCGG TGAGCAAGAT CGACTTTATG CAGAGACAAA AGCAAAGGGT TTTTAG
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Protein sequence | MRSFLAALCF SLLSLCAYAT PAKPVVIHLV TASWQGFADP DETGYYFDIL RRVFPAPDWQ LDVQFMPFAR TLYLVETNRV DMVLSVYKGD VKNSLLSENP VELDSIDAAV TPQIAATWSG MESLSHKKVQ AMLAYRYNML TTTPMFYEEG SDILNMLNSV NAGRTDAVLD YRKNIEALVP QLKAPQQFVI IQGVLKAETY FAFANTEKGR MLKQHFDIEH KKLIDSGEQD RLYAETKAKG F
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