Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3856 |
Symbol | |
ID | 4254419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 4603196 |
End bp | 4604398 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638120501 |
Product | hypothetical protein |
Protein accession | YP_735976 |
Protein GI | 113972183 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGTCA GTTCGTCTTG TATCAAGTTA AGTCTGTTGA CCAGCTTAGT CGGCAGTAGT TTCCTGTGTC TTGCGGCGGA AGCCGAACTT TCCCAAGCGC TTTCGAGCAG CCAAGCTAGG TTGGCCCATA TCACTTCGTC GAATACCCAA TCGGCAAATT TATCCAGCTC GACCTGGCTC ACTGGTCTGC CGAGCATTAG CTTAAGTCAC CTCGGGAGCT TGGATAATAG TAACAGCTAC GAGCAGGAAC TCTCAGTCAA TTTGCCATTT AAATCGCCCG CGCTACACAG CAGCGATAAG CAAATAAAAC AGCTCGCCGA GCAAATTCAT CAACAACAAA CGGCGCTGCA AGCCTTGTAT CTCTCGGGAT TATTAAGGCA GAGCCTGTGG GAATACCGCC AGAGCGAAGT CAAACTGGCG CAGCTTGAGC GCAAACAGCA GTTGCTCGAT AAACTCCATC GCCAGCAAAA ACAACTGACC GATGCGGGGG AATTGCCACT GGCCAACACT CTGCTACTGG AGCGGGAAAG TGTCGATATC GCCTTAAGCC GCGCCGATAT TCTGCAACAA CAAGCCCAAT CTTTAGCCCT ATATCAACAG CTGACGGGCC AAGATCAAAT GCCGAGCGCG ATAGAAGAAA CTGACCGCCC GCTTGGTAAG GGCGCAGAGG CCTTAGCCCA ACATCCCCTA TGGCAATTGC TAAAGCTGCA ACAACAGCAA CACTTGCTGC TGATCCAAAC TCAGCAAGCG GGTGAGCGCG ATCCTTGGAC CGTCTCACTC ACAGCCAAAA ATACCGCGGA TACGGGCGTG GATGATCAGC AGTTAGGCAT AGCCGTGTCA GTGCCCTTAA CCTTGGGCTC GGCGCTATCC CAAAGCGATT TATCCCAATG GCAACAAGCG AATACCGAGC AAAGCCTCAA TCTTGACCGT AGCGCACTCG AGCTTAAAAA CCAGTGGGAT CAATTAGTCC GCCAGCAAAC TAACCTCGTC GAGCAACAGC GCCTACTCAC CCAAGCGCTC GCCCTCAGTC GCACCATTAC CGAGGAACTC GCCAAGGTAA AAGATCAAGA TCAGGTGAGT TATGAAGTCT GGCTGCGCCG CTATATGGAG GCGCTCGACA CCGAATCCCG CTTGGCGCTC AATCGCGTCA GCTTGCAACA ACTGCATTCT CAACAACTCC AAGCCTTAGG AATTTCATTA TGA
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Protein sequence | MSVSSSCIKL SLLTSLVGSS FLCLAAEAEL SQALSSSQAR LAHITSSNTQ SANLSSSTWL TGLPSISLSH LGSLDNSNSY EQELSVNLPF KSPALHSSDK QIKQLAEQIH QQQTALQALY LSGLLRQSLW EYRQSEVKLA QLERKQQLLD KLHRQQKQLT DAGELPLANT LLLERESVDI ALSRADILQQ QAQSLALYQQ LTGQDQMPSA IEETDRPLGK GAEALAQHPL WQLLKLQQQQ HLLLIQTQQA GERDPWTVSL TAKNTADTGV DDQQLGIAVS VPLTLGSALS QSDLSQWQQA NTEQSLNLDR SALELKNQWD QLVRQQTNLV EQQRLLTQAL ALSRTITEEL AKVKDQDQVS YEVWLRRYME ALDTESRLAL NRVSLQQLHS QQLQALGISL
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