Gene Shewmr4_3856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3856 
Symbol 
ID4254419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4603196 
End bp4604398 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content52% 
IMG OID638120501 
Producthypothetical protein 
Protein accessionYP_735976 
Protein GI113972183 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGTCA GTTCGTCTTG TATCAAGTTA AGTCTGTTGA CCAGCTTAGT CGGCAGTAGT 
TTCCTGTGTC TTGCGGCGGA AGCCGAACTT TCCCAAGCGC TTTCGAGCAG CCAAGCTAGG
TTGGCCCATA TCACTTCGTC GAATACCCAA TCGGCAAATT TATCCAGCTC GACCTGGCTC
ACTGGTCTGC CGAGCATTAG CTTAAGTCAC CTCGGGAGCT TGGATAATAG TAACAGCTAC
GAGCAGGAAC TCTCAGTCAA TTTGCCATTT AAATCGCCCG CGCTACACAG CAGCGATAAG
CAAATAAAAC AGCTCGCCGA GCAAATTCAT CAACAACAAA CGGCGCTGCA AGCCTTGTAT
CTCTCGGGAT TATTAAGGCA GAGCCTGTGG GAATACCGCC AGAGCGAAGT CAAACTGGCG
CAGCTTGAGC GCAAACAGCA GTTGCTCGAT AAACTCCATC GCCAGCAAAA ACAACTGACC
GATGCGGGGG AATTGCCACT GGCCAACACT CTGCTACTGG AGCGGGAAAG TGTCGATATC
GCCTTAAGCC GCGCCGATAT TCTGCAACAA CAAGCCCAAT CTTTAGCCCT ATATCAACAG
CTGACGGGCC AAGATCAAAT GCCGAGCGCG ATAGAAGAAA CTGACCGCCC GCTTGGTAAG
GGCGCAGAGG CCTTAGCCCA ACATCCCCTA TGGCAATTGC TAAAGCTGCA ACAACAGCAA
CACTTGCTGC TGATCCAAAC TCAGCAAGCG GGTGAGCGCG ATCCTTGGAC CGTCTCACTC
ACAGCCAAAA ATACCGCGGA TACGGGCGTG GATGATCAGC AGTTAGGCAT AGCCGTGTCA
GTGCCCTTAA CCTTGGGCTC GGCGCTATCC CAAAGCGATT TATCCCAATG GCAACAAGCG
AATACCGAGC AAAGCCTCAA TCTTGACCGT AGCGCACTCG AGCTTAAAAA CCAGTGGGAT
CAATTAGTCC GCCAGCAAAC TAACCTCGTC GAGCAACAGC GCCTACTCAC CCAAGCGCTC
GCCCTCAGTC GCACCATTAC CGAGGAACTC GCCAAGGTAA AAGATCAAGA TCAGGTGAGT
TATGAAGTCT GGCTGCGCCG CTATATGGAG GCGCTCGACA CCGAATCCCG CTTGGCGCTC
AATCGCGTCA GCTTGCAACA ACTGCATTCT CAACAACTCC AAGCCTTAGG AATTTCATTA
TGA
 
Protein sequence
MSVSSSCIKL SLLTSLVGSS FLCLAAEAEL SQALSSSQAR LAHITSSNTQ SANLSSSTWL 
TGLPSISLSH LGSLDNSNSY EQELSVNLPF KSPALHSSDK QIKQLAEQIH QQQTALQALY
LSGLLRQSLW EYRQSEVKLA QLERKQQLLD KLHRQQKQLT DAGELPLANT LLLERESVDI
ALSRADILQQ QAQSLALYQQ LTGQDQMPSA IEETDRPLGK GAEALAQHPL WQLLKLQQQQ
HLLLIQTQQA GERDPWTVSL TAKNTADTGV DDQQLGIAVS VPLTLGSALS QSDLSQWQQA
NTEQSLNLDR SALELKNQWD QLVRQQTNLV EQQRLLTQAL ALSRTITEEL AKVKDQDQVS
YEVWLRRYME ALDTESRLAL NRVSLQQLHS QQLQALGISL