| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3800 |
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| Symbol | |
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| ID | 4254363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 4537002 |
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| End bp | 4537661 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638120445 |
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| Product | electron transport protein SCO1/SenC |
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| Protein accession | YP_735920 |
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| Protein GI | 113972127 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCAAAG GACAAAATAT GCAAGCAAGA ATCTCCAACA AAATCTTAGT GATAGCGATT
CTGTTAATAG GATTGGGTGG ACTATTTGCA GTGAAGTTCA ATCCACCTAA GCCCGTTGAG
CTAGAGAGTG GTTTTTTGTT TCCTGAGGCG TTCGAGCTAG CGCCCTTTGA GCTTGTCGAT
CAACAGCAGA AACCCTTTAC TAATGCCAAT TTGAAGGATC AATGGAGCCT ATTCTTTATC
GGCTTTACCT ATTGTCCCGA TGTCTGTCCG ACCACCTTAA ACAAGCTCGC CGCCGCCTAT
CCTGAGCTGA AAAAAATTGC CCCCATTCAA ATCGTGTTTT TATCCGTAGA TCCGAAGCGG
GACACCCCAG AGAAACTCCT CACCTACGTG AATTTCTTTA ATCCTGAGTT TAAAGCGGTG
ACGGGTGAGC AAACCCAAAT ATTCCCCCTC ACCCGCAGCC TAGGGCTCAC CTATGCCATG
GTCGGCGAAG GGGATAATTA TCAAGTCGAT CATAGTGCTG GCTATGTACT GGTTTCTCCC
CAAGGCACGC GGGTCGCGGT GTTTAAACCC ACGGCAGCCT TAGGTAAAGC CCCTCAAGTA
CTCAACCAGG CCTTGATCAG CGACTTCGAT AAAATCGTTA AAAGCTACAA ACCTAAATAA
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| Protein sequence | MVKGQNMQAR ISNKILVIAI LLIGLGGLFA VKFNPPKPVE LESGFLFPEA FELAPFELVD
QQQKPFTNAN LKDQWSLFFI GFTYCPDVCP TTLNKLAAAY PELKKIAPIQ IVFLSVDPKR
DTPEKLLTYV NFFNPEFKAV TGEQTQIFPL TRSLGLTYAM VGEGDNYQVD HSAGYVLVSP
QGTRVAVFKP TAALGKAPQV LNQALISDFD KIVKSYKPK
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