Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3662 |
Symbol | |
ID | 4254226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 4372340 |
End bp | 4373305 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638120305 |
Product | formate dehydrogenase gamma subunit |
Protein accession | YP_735783 |
Protein GI | 113971990 |
COG category | [C] Energy production and conversion |
COG ID | [COG2864] Cytochrome b subunit of formate dehydrogenase |
TIGRFAM ID | [TIGR01583] formate dehydrogenase, gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGAT TAATCACTGC TATCACTAGT CTTACTGCGG GTATCTACAA CTTACCGCTA CTGGCGAGCG AAACGTTAAT ACCCCAACCT CAACAATGGC AACCCATACA GGAAATCGCC GTACAAGGGG ATATTCCCGA ACTTCGTGGC ATGCCACTAC AACCCGAGTT TCCTGCGCCT TTGGCGCCTG TTAATCAAGG CTATCTCGAA ACACTTGCTC CAGCGACTTG GTGGGCCGAT CTGCTGACCT ACAGTTTCTT TGGGATGTTT TTCGTCTTAG CCCTGTTTGT TTTAATTAAC GGCAAGGCAA AACTGACTCA AGGCTTCTCT GGCCAAAAAG TCAACCGTTG GAGTGGGATG GATGTGTTGT TCCACTGGAT AGGAGCAATC GCCTGCCTAC TGCTGATCGT CACCGGACTG GCGATGATCG CAGGCCGTTT TTGGTTAGAA CCCAATATGG GCGCTGAACG TTGGATCGGT TTTATTGGTA GCTCTGTAGC CATTCATAAC CTTATGGCCT TCCCCTTTAT ATTGGGTTGG TTAGTGATGG TCGTGAAATG GGCCAATAAA CAACTCCCCG AAGCCTGCGA CTTAGGGTGG TTTAAGGCGC TCGGCGGCTA CCTCAACTTT GGGTCATTCA AAGGCAAACA CCCTGATGCA GGCTTTGCTA ACGCGGGCGA AAAACTTTGG TTCTGGTGTT TTGCCCTGTT TGGTGCCCTG ATGATTGGCT CGGGTTTAGT CTTGATGTTC CCAAGCTTGG TCGCAACTAA AGATGGCGCC AATCTCGCCC TGCTCCTGCA TCTCGTGAGC GCTTTCGTGC TCGGGGCATT CACAGTCGTA CATATCTATA TGGCCACAGT GATCTCTGAG GGCGGTATGG AATGCATGCT CACAGGACAA TGTGATGAGA ACTGGGCTAA ACAACACCAC AATCTCTGGT TCCAGAAGTT ACCTAAAAGC AAGTAA
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Protein sequence | MKRLITAITS LTAGIYNLPL LASETLIPQP QQWQPIQEIA VQGDIPELRG MPLQPEFPAP LAPVNQGYLE TLAPATWWAD LLTYSFFGMF FVLALFVLIN GKAKLTQGFS GQKVNRWSGM DVLFHWIGAI ACLLLIVTGL AMIAGRFWLE PNMGAERWIG FIGSSVAIHN LMAFPFILGW LVMVVKWANK QLPEACDLGW FKALGGYLNF GSFKGKHPDA GFANAGEKLW FWCFALFGAL MIGSGLVLMF PSLVATKDGA NLALLLHLVS AFVLGAFTVV HIYMATVISE GGMECMLTGQ CDENWAKQHH NLWFQKLPKS K
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