| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3342 |
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| Symbol | |
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| ID | 4253908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3989559 |
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| End bp | 3990461 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638119980 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_735465 |
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| Protein GI | 113971672 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAAAA TCGCCGCCAT GCGTAGTTTT ATCGAAGTGG CCAACTGTGG CAGCTTTACT
AAGGCCGCAG AACACCTCGA TCTGAGTCGC CTACAGGTTT CACGTCATAT TCAAGAAATT
GAGCAGTGGC TAAGTTTACG TTTACTGCAC CGCACGACCC GCAGCGTGAG CCTCACTCTA
CAGGGTGAAG AAGCCCTGCA ATATTGTCAG CGAGTGCTGA GCGAAGTCGC CGCAATGGAA
AGCCGCGCCC ATAGCCATAA CACCGAATTA GTTGGCAGTA TTCGTATTGC CACGCCCGTC
GGACTTGGGC AACACAGTCT ATTTGATGTG GTCGATCGCT TTATAAAATT ACACCCTAAG
GTCAATATTC AGCTGTTAAT GTCGGACAGT TTTGCTCAAT TAGTGGATGA GCGGGTGGAC
GTGGCACTGC GCTATACCGA GCAGCCCGAT GAGAATTTGA TTGCCCGCAA ACTGATGAAC
ATAGATGCCG TGCTGTGCGC CGCGCCCAGT TACTTGGCTC AAGCCGAGTC GCTAACCGTC
CCTAACGATT TGCTCAGCCA TAATTGCCTT ATCCATAGTT CGCAGCAACA TTGGCAGCTA
CTCAAGGAGC AACAGAGTGA GCTGATTAAA CCTATGGGGA ATCTGATGGC GAATGAAATG
GGAGTCCTCG TCAGCGCCGC ATTGCGCGGG CATGGCATAG CCTACTTGCC CTGCGACTTA
GCTAATCCCT ATCTGGCCAG CGGCCAACTA CAAGAAGTGC TCCCAGCATA CACTGCGCCA
GGGCAAACCC TTTGGGCTGT GTACCTCTCC CGCAGTTATC AACAAGCGCT GGTGCGCGCC
TTTATCGATT GTACCGCCCA GCAATGGCAA CAGGATCTCA GTAAGTGGAC GGCATCGAGT
TAA
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| Protein sequence | MDKIAAMRSF IEVANCGSFT KAAEHLDLSR LQVSRHIQEI EQWLSLRLLH RTTRSVSLTL
QGEEALQYCQ RVLSEVAAME SRAHSHNTEL VGSIRIATPV GLGQHSLFDV VDRFIKLHPK
VNIQLLMSDS FAQLVDERVD VALRYTEQPD ENLIARKLMN IDAVLCAAPS YLAQAESLTV
PNDLLSHNCL IHSSQQHWQL LKEQQSELIK PMGNLMANEM GVLVSAALRG HGIAYLPCDL
ANPYLASGQL QEVLPAYTAP GQTLWAVYLS RSYQQALVRA FIDCTAQQWQ QDLSKWTASS
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