| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3281 |
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| Symbol | |
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| ID | 4253848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3914391 |
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| End bp | 3915317 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638119920 |
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| Product | PHB depolymerase family esterase |
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| Protein accession | YP_735405 |
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| Protein GI | 113971612 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3509] Poly(3-hydroxybutyrate) depolymerase |
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| TIGRFAM ID | [TIGR01840] esterase, PHB depolymerase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.123573 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAAT TGACACTCAT CGCCACTTGC CTCAGCGCAC TGTTATTCAC CCCCGCCTAT
GCCCAGAGTG AGTATCAGGC ATTTAGCGAA TTTGGCGCCA ATCCCGGTGA GTTAACCGCC
TCCTATTTAT CGCCCGAAGG CCCAGGCCAA GATGCGCTCG TAGTGCTGCT GCACGGCTGT
GTGCAGGATG GGGTCGAACT GGCCAACAAT AGCGGTTTAA CCGCCCTCGC CCAAGAGAAA
AAGTTTAGCT TACTGGTGCC ACAACAGAGT TTTGAGAACA ATGTAAAGCG TTGTTATAAC
TGGTTTTCAG CGCAGGATAC TCAGGTGGAT AGCGGCGAGA TGCTATCGCT GAAAAACATG
ATAGCCAAAG CCCAATCCCA ATCCGGCGCA AAACGCGTCT ATGTGATTGG CCTGTCCGCC
GGTGGCGCCA TGGCCAGCGC CGCACTGGTC AATTATCCCG ATTTATTCAC CGCAGGCGCG
GTGATCGCAG GCCTGCCTTA CCCCTGCGCC GATAACCTGA CCAAAGCCAT TTCCTGCATG
AAAAAGGGCC CCGCAGAGTC TGTTGAAGAA TTAGTGAGTT TTGCCAAACA GGTGCATCCG
AACCAACAAC ACTGGCCCGC CTTAACCGTG TGGACCGGGC AAAATGATGT GGTGGTGAAT
CCTGAAAATG CCAAACAACT CTCGGCCCAG TGGGTCGCAC TGACCCAAGC GAATAAAACA
CCAAGAGTCG AGCAATATGC CGACTATAGT GTTAGCACTT GGTCCGATAC GAGTGGTAAT
AACCTTATTT CGTTAGTCGA AATAAATAAT ATGGGCCATG GCATTGCCGT TAATCCAGAT
ATTAAAAACG GCGGGAAAAC GGGAGACTTT TTACTAAAAG CGCCTATCAG CAGCATGCCA
GAAATAATCA ATCTTTGGGG GATATAG
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| Protein sequence | MRKLTLIATC LSALLFTPAY AQSEYQAFSE FGANPGELTA SYLSPEGPGQ DALVVLLHGC
VQDGVELANN SGLTALAQEK KFSLLVPQQS FENNVKRCYN WFSAQDTQVD SGEMLSLKNM
IAKAQSQSGA KRVYVIGLSA GGAMASAALV NYPDLFTAGA VIAGLPYPCA DNLTKAISCM
KKGPAESVEE LVSFAKQVHP NQQHWPALTV WTGQNDVVVN PENAKQLSAQ WVALTQANKT
PRVEQYADYS VSTWSDTSGN NLISLVEINN MGHGIAVNPD IKNGGKTGDF LLKAPISSMP
EIINLWGI
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